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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 gi 11230853ornibactin receptor precursor [Burkholderia cepacia]Length755 (1 .. 755)
Sequence 2 gi 16121259putative hydroxamate-type ferrisiderophore receptor [Yersinia pestis]Length699 (1 .. 699)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  127 bits (320), Expect = 4e-28
Identities = 152/673 (22%), Positives = 269/673 (39%), Gaps = 38/673 (5%)





Query: 91  AKRSTTGTKTDTPLSEIPQTINVVTAQQIEMTGATDVNAALRYVPGFSSYGSDNRSDWYA 150
           A  S T  ++   + + PQ + VVT   +E    T++  AL +V G +   +   +    
Sbjct: 43  ATTSVTANRSPANIIDTPQNVTVVTHPVLEDYDVTNLGEALYFVSGITQSNTLGGTQDAL 102

Query: 151 ALRGFTPTAYVNGLQVPNTINLASWRVDPYMIDSISVLRGPTSVLYGAGDPGAIIDVHTK 210
             RGF      +G  + + I     R      + + VL+GP+S+LYG  +PG +I+V +K
Sbjct: 103 IKRGFGNNR--DGSILHDGIRSIQARNFTPTSERVEVLKGPSSMLYGMNEPGGLINVISK 160

Query: 211 LADGERVREAGVQIGNYARKQFMIDVGDKLDPDGKYAYRFVGVARDGNALTGPNNDQRVA 270
               +          ++      +DV   L   G +A R +   ++ +       +++  
Sbjct: 161 KPQLDPHVHLEANASSFKGGGGQLDVTGPLGESG-FAGRLIIDHQETDYWRNFGRNRQTV 219

Query: 271 LAPSFRWRPDADTSLTLS---ATYLQDWGDISSNFLPAQGTVLPNPNGQINKDIYEGDGN 327
           +APS  W  + +T++ L+     YL  + D  +   P  G  +  P  +        D +
Sbjct: 220 VAPSLDWYGE-NTTVHLAWERMEYLVPF-DRGTVIDPRTGKPVDTPRDR------RFDES 271

Query: 328 FNYYRKKQWSIGYQFERNLTPAWTFRQNTRLMHLSLDNASVFANGFAGDSLTDVSRWAGL 387
           +N  R  Q ++ +    +L   W+ + N      S  +    A  F  ++     +    
Sbjct: 272 YNATRGDQDTVTFSINHDLNEFWSTQLNYAFSRNSYSDNQARATAFNAETGVLTRQSDAT 331

Query: 388 FQMNYSRFDIDNNLEGRFATGPLQHTLLLGFQYNRQTATDSEWLAAAPT--LNLYNPVY- 444
                    +   + G    G   H L+ G  Y  +     + +  +     N+Y+P+Y 
Sbjct: 332 ANAKSHSQAVQWVVNGDLDWGFTHHQLMFGIDYEARRVFRGDMIRGSKNNGFNVYDPIYG 391

Query: 445 --TPVTMGVFSDPDAXXXXXXXXXXXXFGLYAQDQIKWNRWTLTLGGR--EDWVNMRQDD 500
              P T    +D D               L+ QD ++ N   L LGG   + +  M    
Sbjct: 392 TLPPSTAVSAADSDQRENIDSRA------LFIQDSMRLNEHWLLLGGLRYDSFDVMAGKG 445

Query: 501 RAAGTSTKADVTAFTGRVGLTYQGDYGLSPYISYATSFNPLIGVNLLGGGLPQPTRGKQI 560
           R    +T +  +    R G+ Y  +   S Y+SY  SF P + +      LP P  GK  
Sbjct: 446 RPFKKNTDSSDSRLVPRAGVVYNLNDWSSLYVSYTESFKPNVSIATAIDALP-PEYGKSW 504

Query: 561 EAGLRWQPPGKNLMLNAAIYQINQTNGITPALPSQDPGGTKSVQSGEVRSRGIELSATGK 620
           EAG +     + +    A+Y I++ N +   L     G T +  +G+ RSRG+EL   GK
Sbjct: 505 EAGYKIDINNR-VTGTLAVYDIHKRNIMVSELVD---GETVTRTAGKARSRGLELDMAGK 560

Query: 621 VTPNLSVVASYVYQDVKVIQANDVSLNNWPVDIPRPRQMASLWTDW-TWHTXXXXXXXXX 679
           VT +LS++ SY Y D ++ +  D + N+ P ++ R      L  D+ +            
Sbjct: 561 VTDSLSLIGSYAYTDARLTEDPDNNGNDLP-NVARHTAALFLSRDFGSTSLISGDEVKAG 619

Query: 680 XXIRYQSASAGAADNSLTVSSVTLFDAGVHY----DTRNWRFAVNGTNLFNRHYISGCQS 735
              RY    AG A NS  + + T+ DA + +         ++ +N  NLF++ Y     +
Sbjct: 620 IGARYVGKRAGDAANSFWLDNYTVADAFIAWKMPLSGYQLKWQLNVKNLFDKTYYPSSAN 679

Query: 736 TNVCIFGTDRTVI 748
                 G  R V+
Sbjct: 680 NLRIAIGEPRQVV 692
CPU time:     0.22 user secs.	    0.03 sys. secs	    0.25 total secs.

Gapped
Lambda     K      H
   0.316    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4335
Number of Sequences: 0
Number of extensions: 402
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 755
length of database: 260,033,525
effective HSP length: 130
effective length of query: 625
effective length of database: 215,259,575
effective search space: 134537234375
effective search space used: 134537234375
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)