Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.RID: 1008014355-22570-20551
Query= gi|16123049|ref|NP_406362.1| putative diacylglycerol kinase [Yersinia pestis] (296 letters)
Database: nr 812,137 sequences; 258,228,741 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQsScore E Sequences producing significant alignments: (bits) Value ref|NP_406362.1| (NC_003143) putative diacylglycerol kinase... 565 e-161 ref|NP_288591.1| (NC_002655) orf, hypothetical protein [Esc... 386 e-107 ref|NP_416590.1| (NC_000913) orf, hypothetical protein [Esc... 385 e-107 ref|NP_461084.1| (NC_003197) putative diacylglycerol kinase... 375 e-104 ref|NP_251713.1| (NC_002516) conserved hypothetical protein... 207 2e-53 ref|NP_372422.1| (NC_002758) conserved hypothetical protein... 131 2e-30 ref|NP_388554.1| (NC_000964) similar to hypothetical protei... 130 5e-30 ref|NP_464301.1| (NC_003210) conserved hypothetical protein... 123 6e-28 ref|NP_471199.1| (NC_003212) similar to unknown protein [Li... 122 9e-28 ref|NP_470110.1| (NC_003212) conserved hypothetical protein... 122 9e-28 ref|NP_241542.1| (NC_002570) BH0676~unknown conserved prote... 120 4e-27 ref|NP_465278.1| (NC_003210) similar to unknown protein [Li... 119 8e-27 ref|NP_472031.1| (NC_003212) conserved hypothetical protein... 116 7e-26 ref|NP_466080.1| (NC_003210) conserved hypothetical protein... 110 3e-24 ref|NP_266576.1| (NC_002662) transcriptional regulator [Lac... 102 8e-22 ref|NP_268975.1| (NC_002737) conserved hypothetical protein... 98 3e-20 ref|NP_347316.1| (NC_003030) Unsharacterized protein, BmrU ... 90 6e-18 ref|NP_242819.1| (NC_002570) BH1953~unknown conserved prote... 87 5e-17 ref|NP_486921.1| (NC_003272) hypothetical protein [Nostoc s... 85 2e-16 ref|NP_390280.1| (NC_000964) multidrug resistance protein [... 83 1e-15 ref|NP_109525.1| (NC_002682) hypothetical protein [Mesorhiz... 71 3e-12 ref|NP_485916.1| (NC_003272) hypothetical protein [Nostoc s... 70 5e-12 ref|NP_108258.1| (NC_002678) hypothetical protein [Mesorhiz... 69 1e-11 ref|NP_104744.1| (NC_002678) similar to multidrug resistanc... 66 1e-10 ref|NP_103911.1| (NC_002678) hypothetical protein [Mesorhiz... 59 1e-08 ref|NP_442724.1| (NC_000911) hypothetical protein [Synechoc... 59 1e-08 ref|NP_267893.1| (NC_002662) conserved hypothetical protein... 58 3e-08 ref|NP_269308.1| (NC_002737) conserved hypothetical protein... 58 3e-08 ref|NP_371250.1| (NC_002758) hypothetical protein [Staphylo... 57 4e-08 ref|NP_228169.1| (NC_000853) conserved hypothetical protein... 54 5e-07 ref|NP_345520.1| (NC_003028) conserved hypothetical protein... 52 2e-06 ref|NP_358541.1| (NC_003098) Conserved hypothetical protein... 51 3e-06 ref|NP_216768.1| (NC_000962) hypothetical protein Rv2252 [M... 51 3e-06 ref|NP_242640.1| (NC_002570) multidrug resistance protein [... 50 6e-06 ref|NP_295086.1| (NC_001263) conserved hypothetical protein... 49 1e-05 ref|NP_385144.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 45 2e-04 ref|NP_295956.1| (NC_001263) conserved hypothetical protein... 42 0.001 gb|AAL10002.1|AF374354_10 (AF374354) unknown [Magnetospiril... 42 0.002 ref|NP_354025.1| (NC_003062) AGR_C_1840p [Agrobacterium tum... 40 0.006 emb|CAC05978.1| (AL391763) hypothetical protein [Streptomyc... 38 0.026 ref|NP_295283.1| (NC_001263) conserved hypothetical protein... 37 0.092 ref|NP_419976.1| (NC_002696) hypothetical protein [Caulobac... 33 1.2 emb|CAC43413.1| (X16664) hypothetical protein [Escherichia ... 32 2.8 ref|NP_298777.1| (NC_002488) aminopeptidase N [Xylella fast... 31 3.0 ref|NP_390872.1| (NC_000964) ytlR [Bacillus subtilis] >gi|7... 31 3.4 pir||T34741 hypothetical protein SC1E6.20c SC1E6.20c - Stre... 31 4.7 ref|NP_458729.1| (NC_003198) conserved hypothetical protein... 30 6.7 ref|NP_217734.1| (NC_000962) hypothetical protein Rv3218 [M... 30 7.5 ref|NP_149242.1| (NC_001988) Acetyl coenzyme A acetyltransf... 30 7.8 ref|NP_267955.1| (NC_002662) transcriptional regulator [Lac... 30 9.6Alignments >ref|NP_406362.1| (NC_003143) putative diacylglycerol kinase [Yersinia pestis] emb|CAC92107.1| (AJ414154) putative diacylglycerol kinase [Yersinia pestis] Length = 296 Score = 565 bits (1456), Expect = e-161 Identities = 283/296 (95%), Positives = 283/296 (95%) Query: 1 MPHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIA 60 MPHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIA Sbjct: 1 MPHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIA 60 Query: 61 GGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVA 120 GGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVA Sbjct: 61 GGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVA 120 Query: 121 IDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIH 180 IDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIH Sbjct: 121 IDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIH 180 Query: 181 GPDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE 240 GPDFHWSGDALV LLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE Sbjct: 181 GPDFHWSGDALVIGIGNGKQAGGGQLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE 240 Query: 241 KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLLG 296 KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLLG Sbjct: 241 KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLLG 296>ref|NP_288591.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933] ref|NP_310919.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7] gb|AAG57146.1|AE005435_4 (AE005435) orf, hypothetical protein [Escherichia coli O157:H7 EDL933] dbj|BAB36315.1| (AP002560) hypothetical protein [Escherichia coli O157:H7] Length = 299 Score = 386 bits (992), Expect = e-107 Identities = 189/294 (64%), Positives = 229/294 (77%) Query: 2 PHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAG 61 P +LLILNGK + N +REA+ +R+EG+T+HVR+TWE GDA RYVEEA L V+TVIAG Sbjct: 5 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKLGVATVIAG 64 Query: 62 GGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAI 121 GGDGTINEV+TAL+ D P LGILPLGTANDFAT IP ++ AL+LA+ G A+AI Sbjct: 65 GGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGNAIAI 124 Query: 122 DLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIHG 181 D+AQVN + FINMATGGFGTRITTETP+KLKAALGGVSY IHGLMR+D L+ D C+I G Sbjct: 125 DMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGGVSYIIHGLMRMDTLQPDRCEIRG 184 Query: 182 PDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGEK 241 +FHW GDALV LCP+ALINDGL+QLR+ T E+LPA++STL + E Sbjct: 185 ENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDED 244 Query: 242 NKNVIDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLL 295 N N+I+ W DI AP++ITFNLDGEPLSG++FHIEILP A++CRLPP+CPLL Sbjct: 245 NPNIIEGASSWFDIQAPHEITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLL 298>ref|NP_416590.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12] sp|P76407|YEGS_ECOLI HYPOTHETICAL 32.0 KDA PROTEIN IN OGRK-GATR INTERGENIC REGION pir||E64975 hypothetical protein b2086 - Escherichia coli (strain K-12) dbj|BAA15939.1| (D90846) BmrU protein. [Escherichia coli] dbj|BAA15950.1| (D90847) BmrU protein. [Escherichia coli] gb|AAC75147.1| (AE000298) orf, hypothetical protein [Escherichia coli K12] Length = 299 Score = 385 bits (989), Expect = e-107 Identities = 188/294 (63%), Positives = 227/294 (76%) Query: 2 PHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAG 61 P +LLILNGK + N +REA+ +R+EG+T+HVR+TWE GDA RYVEEA V+TVIAG Sbjct: 5 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAG 64 Query: 62 GGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAI 121 GGDGTINEV+TAL+ D P LGILPLGTANDFAT IP ++ AL+LA+ G A+AI Sbjct: 65 GGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAI 124 Query: 122 DLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIHG 181 D+AQVN + FINMATGGFGTRITTETP+KLKAALG VSY IHGLMR+D L+ D C+I G Sbjct: 125 DMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRG 184 Query: 182 PDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGEK 241 +FHW GDALV LCP+ALINDGL+QLR+ T E+LPA++STL + E Sbjct: 185 ENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDED 244 Query: 242 NKNVIDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLL 295 N N+I+ W DI AP+DITFNLDGEPLSG++FHIEILP A++CRLPP+CPLL Sbjct: 245 NPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLL 298>ref|NP_461084.1| (NC_003197) putative diacylglycerol kinase catalytic domain [Salmonella typhimurium LT2] gb|AAL21043.1| (AE008795) putative diacylglycerol kinase catalytic domain [Salmonella typhimurium LT2] Length = 299 Score = 375 bits (963), Expect = e-104 Identities = 184/294 (62%), Positives = 222/294 (74%) Query: 2 PHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAG 61 P +LLILNGK + N +REA+ +RDEG+ +HVR+TWE GDA+RYV+EA L V TVIAG Sbjct: 5 PASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVETVIAG 64 Query: 62 GGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAI 121 GGDGTINEV+TAL+ + P LG+LPLGTANDFAT IP ++ AL+LA+ G A+ I Sbjct: 65 GGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGNAMEI 124 Query: 122 DLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIHG 181 D+A VN + FINMATGGFGTRITTETP+KLKAALGGVSY IHGLMR+D L D C+I G Sbjct: 125 DMAMVNDKTCFINMATGGFGTRITTETPEKLKAALGGVSYLIHGLMRMDTLTPDRCEIRG 184 Query: 182 PDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGEK 241 +FHW GDALV LCP ALINDGL+QLR+ T +ELLPA+ STL + Sbjct: 185 ENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLTQSDD 244 Query: 242 NKNVIDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLL 295 N N+ID W DI AP++ITFNLDGEPLSG+ FHIE+LP A++CRLPP+CPLL Sbjct: 245 NPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLL 298>ref|NP_251713.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa] pir||D83268 conserved hypothetical protein PA3023 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06411.1|AE004727_7 (AE004727) conserved hypothetical protein [Pseudomonas aeruginosa] Length = 302 Score = 207 bits (528), Expect = 2e-53 Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 6/293 (2%) Query: 5 LLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAGGGD 64 LL+L+GK++GN EVR AV R+ G L VR+TWE GDA+R VEEA +T++AGGGD Sbjct: 7 LLVLHGKQAGNEEVRAAVAAQREAGRELAVRVTWEDGDARRIVEEALAAGYATLVAGGGD 66 Query: 65 GTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAIDLA 124 GT+ EVA AL L ILPLGTANDFA IPL+ AL L + A IDL Sbjct: 67 GTLREVAEALAR--GRGEASLAILPLGTANDFARAAGIPLEPAAALALLDQ-TARPIDLG 123 Query: 125 QVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIHGPDF 184 +VNG+ F+NMATGGFG+++T T + LK LGG +Y + GL R + A + PDF Sbjct: 124 EVNGK-LFLNMATGGFGSKVTANTSEDLKKVLGGAAYLLTGLTRFSEVHAAQGRFSAPDF 182 Query: 185 HWSGDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLL-TAKELLPAVLSTLFNGEKNK 243 W G+ L +LCP A ++DGL+ + +L T ++++ + + L G + Sbjct: 183 QWEGEFLALGIGNGRQAGGGHVLCPQARVDDGLLDVSILPTPQDMVGTLGTLLGGGNGVE 242 Query: 244 NV-IDATVPWLDITAPNDITFNLDGEPLSGRHFHIEILPHAIQCRLPPNCPLL 295 ++ + A VPWL++ A + NLDGEPL GR + P A++ LP PLL Sbjct: 243 SLFVRARVPWLEVEAAEGLDVNLDGEPLEGRKLRFSVSPGALRVHLPAGSPLL 295>ref|NP_372422.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_375005.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB42984.1| (AP003135) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB58060.1| (AP003363) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] Length = 315 Score = 131 bits (330), Expect = 2e-30 Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 7/264 (2%) Query: 9 NGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAGGGDGTIN 68 +GKE E+ +A+ + G T + GDA E A +IA GGDGT+N Sbjct: 13 SGKELFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLN 72 Query: 69 EVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAIDLAQVNG 128 EV + P RP LG++P+GT NDF +IP I AL + ++G + +D+ ++N Sbjct: 73 EVVNGIAEKP--NRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMN- 129 Query: 129 EHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIHGPDFHWSG 188 YFIN+A GG T+++ ETP KLK+ +G +Y+I G L +KA +I + G Sbjct: 130 NRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQG 189 Query: 189 DALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKEL--LPAVLSTLFNGEKNKN-- 244 +AL+ L PDA ++DG L ++ L L +++ GE K+ Sbjct: 190 EALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPK 249 Query: 245 VIDATVPWLDITAPNDITFNLDGE 268 VI ++I++ D+ N+DGE Sbjct: 250 VIYEKAKAINISSFTDLQLNVDGE 273>ref|NP_388554.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] pir||F69795 conserved hypothetical protein yerQ - Bacillus subtilis emb|CAB12492.1| (Z99107) similar to hypothetical proteins [Bacillus subtilis] Length = 303 Score = 130 bits (327), Expect = 5e-30 Identities = 86/265 (32%), Positives = 128/265 (47%), Gaps = 8/265 (3%) Query: 9 NGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAGGGDGTIN 68 +G+E + + ++ G T GDA +EAA +IA GGDGTIN Sbjct: 12 SGREIFKKHLAQVLQKFEQAGYETSTHATTCAGDATHAAKEAALREFDLIIAAGGDGTIN 71 Query: 69 EVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQ-IENALQLAVKGRAVAIDLAQVN 127 EV L P D RP LG++P+GT NDFA IP + I A + G A ID+ QVN Sbjct: 72 EVVNGLA--PLDNRPTLGVIPVGTTNDFARALGIPREDILKAADTVINGVARPIDIGQVN 129 Query: 128 GEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIHGPDFHWS 187 G+ YFIN+A GG T +T + P KLK LG ++Y++ G+ L +L+ +I + Sbjct: 130 GQ-YFINIAGGGRLTELTYDVPSKLKTMLGQLAYYLKGMEMLPSLRPTEVEIEYDGKLFQ 188 Query: 188 GDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKEL--LPAVLSTLFNGE--KNK 243 G+ ++ L PD+ +NDG+ L +L L V + GE ++ Sbjct: 189 GEIMLFLVTLTNSVGGFEKLAPDSSLNDGMFDLMILKKANLAEFIRVATMALRGEHINDQ 248 Query: 244 NVIDATVPWLDITAPNDITFNLDGE 268 ++I + + + NLDGE Sbjct: 249 HIIYTKANRVKVNVSEKMQLNLDGE 273>ref|NP_464301.1| (NC_003210) conserved hypothetical protein [Listeria monocytogenes EGD-e] emb|CAC98852.1| (AL591976) conserved hypothetical protein [Listeria monocytogenes] Length = 309 Score = 123 bits (309), Expect = 6e-28 Identities = 98/291 (33%), Positives = 141/291 (47%), Gaps = 17/291 (5%) Query: 1 MPHTLLILN---GKESGNP---EVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLA 54 M LLI+N GKE G + E +K DE + VR+T + GDA + AA Sbjct: 1 MGKALLIVNPSSGKEKGKTYQGKTEEVLKKRYDE---VEVRLTEKAGDATEFASWAAEQG 57 Query: 55 VSTVIAGGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAV 114 VIA GGDGT+NE L +KRP G +PLGT ND A IPL+ E A+Q Sbjct: 58 FEAVIAMGGDGTLNETINGLAI--HEKRPDFGFIPLGTVNDLARSVGIPLKPEKAIQALE 115 Query: 115 KGRAVAIDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKA 174 K AV +D+ ++ G+ YF+N+ G + + + K G V+YF+ GL + + Sbjct: 116 KAIAVPMDVGRI-GDQYFMNVLAIGMIAQAVDQVSVEQKTKFGSVAYFLEGLKAFNRNEL 174 Query: 175 DSCKIHGPDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDGLMQLRLLTAKELLPA--V 232 KI + W G+A + PDA I+DG + + +LT LL A + Sbjct: 175 LHFKIEYDEEVWEGEAALVVAGLTKSVGGMESWAPDAKIDDGYLHIIILTKLGLLDAANM 234 Query: 233 LSTLFNGE-KNKN-VIDATVPWLDITAP-NDITFNLDGEPLSGRHFHIEIL 280 + L G KN + V+ L I A +D++ N+DG+P G IE+L Sbjct: 235 IPQLIRGNLKNSDGVVYIKTKKLTIDASGDDLSINVDGDPGPGVPAEIEVL 285>ref|NP_471199.1| (NC_003212) similar to unknown protein [Listeria innocua] emb|CAC97095.1| (AL596170) similar to unknown protein [Listeria innocua] Length = 310 Score = 122 bits (307), Expect = 9e-28 Identities = 80/236 (33%), Positives = 121/236 (50%), Gaps = 7/236 (2%) Query: 37 TWEHGDAKRYVEEAATLAVSTVIAGGGDGTINEVATALMSLPADKRPCLGILPLGTANDF 96 T E GDAK EEA V+A GGDGTINEV + P RP +GI+P GT NDF Sbjct: 42 TAEPGDAKHAAEEAVRDRYDLVVAAGGDGTINEVINGIAEQPY--RPKVGIIPTGTTNDF 99 Query: 97 ATGCNIPLQIENALQLAVKGRAVAIDLAQVNGEHYFINMATGGFGTRITTETPDKLKAAL 156 A ++P + A ++ G++VA+D+ + N + YFIN+ GG T +T + P +LK L Sbjct: 100 ARALHVPRDVIKATKIIAAGQSVAMDIGKAN-DTYFINIGGGGRLTELTYDVPSRLKTML 158 Query: 157 GGVSYFIHGLMRLDALKADSCKIHGPDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDG 216 G ++Y++ G+ L +LKA K+ + G+ + + PDA ++DG Sbjct: 159 GQLAYYLKGIEMLPSLKATKVKVEYDQGVFEGEVMFFLLGLTNSIGGFEKIAPDAKLDDG 218 Query: 217 LMQLRLLTAKELLPAV-LSTL-FNGE--KNKNVIDATVPWLDITAPNDITFNLDGE 268 L ++ L + L TL G+ K NVI + + + + + NLDGE Sbjct: 219 KFSLIIVKKVNLAEFIRLVTLALRGDHIKEPNVIYVKSEKVSVHSEDKMLINLDGE 274>ref|NP_470110.1| (NC_003212) conserved hypothetical protein [Listeria innocua] emb|CAC96000.1| (AL596166) conserved hypothetical protein [Listeria innocua] Length = 309 Score = 122 bits (307), Expect = 9e-28 Identities = 93/293 (31%), Positives = 141/293 (47%), Gaps = 21/293 (7%) Query: 1 MPHTLLILN---GKESGNP---EVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLA 54 M LLI+N GKE G + E +K DE + VR+T + GDA + A+ Sbjct: 1 MGKALLIVNPSSGKEKGKTYQGKTEEVLKKRYDE---VEVRLTEKAGDATEFASWASEQG 57 Query: 55 VSTVIAGGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAV 114 VIA GGDGT+NE L +KRP G +PLGT ND A IPL+ E A+Q Sbjct: 58 FDAVIAMGGDGTLNETINGLAI--HEKRPDFGFIPLGTVNDLARSVGIPLKPEKAIQALE 115 Query: 115 KGRAVAIDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKA 174 K +A+ +D+ ++ G+ YF+N+ G + + + K G V+YF+ GL + + Sbjct: 116 KAKAIPMDIGRI-GDQYFMNVLAIGMIAQAVDQVSVEQKTKFGSVAYFLEGLKAFNRNEL 174 Query: 175 DSCKIHGPDFHWSGDALVXXXXXXXXXXXXXLLCPDALINDG------LMQLRLLTAKEL 228 K+ + W G+A + PDA I+DG L +L LL A + Sbjct: 175 LHFKLEYDEEVWEGEAALVVAGLTKSVGGMESWAPDAKIDDGYLHVVVLTKLGLLDAANM 234 Query: 229 LPAVLSTLFNGEKNKNVIDATVPWLDITAP-NDITFNLDGEPLSGRHFHIEIL 280 +P ++ N + + V+ L I A +D++ N+DG+P G IE+L Sbjct: 235 IPQLIRG--NLKNSDGVVYIKTKKLTIDASGDDLSINVDGDPGPGVPAEIEVL 285Database: nr Posted date: Dec 7, 2001 11:20 PM Number of letters in database: 258,228,741 Number of sequences in database: 0 Lambda K H 0.320 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,718,582 Number of Sequences: 0 Number of extensions: 1663286 Number of successful extensions: 4628 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 4529 Number of HSP's gapped (non-prelim): 62 length of query: 296 length of database: 69,736,367 effective HSP length: 110 effective length of query: 186 effective length of database: 44,566,387 effective search space: 8289347982 effective search space used: 8289347982 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)