BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
RID: 1012999360-21663-26357
Query= YP02855
(464 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
865,418 sequences; 272,484,131 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_406361.1| (NC_003143) putative protease [Yersinia pe... 959 0.0
ref|NP_416585.1| (NC_000913) orf, hypothetical protein [Esc... 785 0.0
ref|NP_456696.1| (NC_003198) putative protease [Salmonella ... 785 0.0
ref|NP_288589.1| (NC_002655) orf, hypothetical protein [Esc... 784 0.0
ref|NP_245170.1| (NC_002663) unknown [Pasteurella multocida... 748 0.0
ref|NP_438581.1| (NC_000907) protease, putative [Haemophilu... 740 0.0
ref|NP_230366.1| (NC_002505) protease, putative [Vibrio cho... 709 0.0
ref|NP_254127.1| (NC_002516) probable peptidase [Pseudomona... 680 0.0
ref|NP_284630.1| (NC_003116) probable protease [Neisseria m... 526 e-148
ref|NP_274669.1| (NC_003112) protease, putative [Neisseria ... 519 e-146
gb|AAK08039.1|AF319532_5 (AF319532) Col [Neisseria meningit... 388 e-107
gb|AAK08053.1|AF319535_8 (AF319535) Col [Neisseria meningit... 375 e-103
gb|AAK08043.1|AF319533_4 (AF319533) Col [Neisseria meningit... 371 e-102
ref|NP_562687.1| (NC_003366) probable protease [Clostridium... 298 9e-80
ref|NP_348313.1| (NC_003030) Collagenase family protease [C... 290 2e-77
ref|NP_349576.1| (NC_003030) Predicted protease from collag... 289 4e-77
gb|AAC12939.1| (AF055344) unknown [Francisella tularensis] 278 7e-74
ref|NP_222876.1| (NC_000921) putative PROTEASE [Helicobacte... 239 3e-62
ref|NP_268851.1| (NC_002737) putative protease [Streptococc... 239 3e-62
ref|NP_206968.1| (NC_000915) collagenase (prtC) [Helicobact... 238 1e-61
ref|NP_268146.1| (NC_002662) protease [Lactococcus lactis s... 236 5e-61
ref|NP_242140.1| (NC_002570) protease [Bacillus halodurans]... 234 2e-60
ref|NP_345886.1| (NC_003028) peptidase, U32 family [Strepto... 233 2e-60
ref|NP_358877.1| (NC_003098) Protease [Streptococcus pneumo... 233 4e-60
ref|NP_470297.1| (NC_003212) similar to proteases [Listeria... 229 4e-59
ref|NP_464486.1| (NC_003210) similar to proteases [Listeria... 228 7e-59
ref|NP_390612.1| (NC_000964) similar to protease [Bacillus ... 228 1e-58
ref|NP_281873.1| (NC_002163) putative protease [Campylobact... 223 5e-57
ref|NP_372136.1| (NC_002758) hypothetical protein [Staphylo... 221 1e-56
ref|NP_275787.1| (NC_000916) collagenase [Methanothermobact... 185 7e-46
ref|NP_247054.1| (NC_000909) collagenase (prtC) [Methanococ... 177 2e-43
ref|NP_348957.1| (NC_003030) Collagenase family protease [C... 174 2e-42
ref|NP_276869.1| (NC_000916) collagenase [Methanothermobact... 174 2e-42
ref|NP_485781.1| (NC_003272) probable proteinase [Nostoc sp... 159 7e-38
ref|NP_562798.1| (NC_003366) probable collagenase [Clostrid... 153 3e-36
gb|AAF42758.1|AF128839_2 (AF128839) unknown [Salmonella ent... 139 9e-32
ref|NP_455893.1| (NC_003198) putative peptidase [Salmonella... 138 1e-31
ref|NP_460563.1| (NC_003197) putative collagenase [Salmonel... 138 1e-31
ref|NP_310066.1| (NC_002695) putative collagenase [Escheric... 137 2e-31
ref|NP_287726.1| (NC_002655) putative collagenase [Escheric... 137 2e-31
sp|P76104|YDCP_ECOLI PUTATIVE PROTEASE YDCP PRECURSOR >gi|1... 137 3e-31
ref|NP_390613.1| (NC_000964) similar to protease [Bacillus ... 136 3e-31
ref|NP_213692.1| (NC_000918) collagenase [Aquifex aeolicus]... 135 1e-30
ref|NP_295853.1| (NC_001263) protease, putative [Deinococcu... 135 1e-30
ref|NP_242139.1| (NC_002570) protease [Bacillus halodurans]... 133 4e-30
ref|NP_230301.1| (NC_002505) protease, putative [Vibrio cho... 132 1e-29
dbj|BAA15063.1| (D90782) Collagenase precursor (EC 3.4.-.-)... 130 4e-29
ref|NP_406938.1| (NC_003143) putative protease [Yersinia pe... 129 5e-29
ref|NP_522531.1| (NC_003296) PROBABLE PROTEASE PROTEIN [Ral... 129 6e-29
gb|AAC64577.1| (AF088981) STM-proteaseA [Proteus mirabilis] 129 8e-29
Alignments
>ref|NP_406361.1| (NC_003143) putative protease [Yersinia pestis]
emb|CAC92106.1| (AJ414154) putative protease [Yersinia pestis]
Length = 464
Score = 959 bits (2478), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MSSSSFTTERPFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAL 60
MSSSSFTTERPFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAL
Sbjct: 1 MSSSSFTTERPFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAL 60
Query: 61 GIQEAHALGKRFYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQ 120
GIQEAHALGKRFYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQ
Sbjct: 61 GIQEAHALGKRFYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQ 120
Query: 121 MDIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALC 180
MDIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALC
Sbjct: 121 MDIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALC 180
Query: 181 MAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTL 240
MAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTL
Sbjct: 181 MAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTL 240
Query: 241 GIGAPTDKVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEG 300
GIGAPTDKVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEG
Sbjct: 241 GIGAPTDKVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEG 300
Query: 301 RTKSFYYCARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTY 360
RTKSFYYCARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTY
Sbjct: 301 RTKSFYYCARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTY 360
Query: 361 EYGYSVSERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKG 420
EYGYSVSERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKG
Sbjct: 361 EYGYSVSERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKG 420
Query: 421 QPADIAPGNGHIMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEKA 464
QPADIAPGNGHIMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEKA
Sbjct: 421 QPADIAPGNGHIMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEKA 464
>ref|NP_416585.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P76403|YEGQ_ECOLI PUTATIVE PROTEASE YEGQ
pir||H64974 hypothetical protein b2081 - Escherichia coli (strain K-12)
dbj|BAA15936.1| (D90846) Collagenase precursor (EC 3.4.-.-). [Escherichia coli]
dbj|BAA15947.1| (D90847) Collagenase precursor (EC 3.4.-.-). [Escherichia coli]
gb|AAC75142.1| (AE000298) orf, hypothetical protein [Escherichia coli K12]
Length = 453
Score = 785 bits (2026), Expect = 0.0
Identities = 377/452 (83%), Positives = 416/452 (91%)
Query: 12 FTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAHALGKR 71
F PELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENL LGI EAHALGK+
Sbjct: 2 FKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKK 61
Query: 72 FYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANA 131
FYVVVNIAPHN+KLKTF+RDLKPV+EMGPDALIMSDPGLIM+VR+ FP+M IHLSVQANA
Sbjct: 62 FYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQANA 121
Query: 132 VNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSG 191
VNWATVKFWQQMGLTRVILSRELSLEEI EIR QVP+ME+E+FVHGALCMAYSGRCLLSG
Sbjct: 122 VNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLSG 181
Query: 192 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFV 251
YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVH ++PI V+NVEPTLGIGAPTDKVF+
Sbjct: 182 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVFM 241
Query: 252 IEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCART 311
IEEAQRPGEYMTA EDEHGTYIMNSKDLRAI HVERLT++GVHSLKIEGRTKSFYYCART
Sbjct: 242 IEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCART 301
Query: 312 AQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTYEYGYSVSERQQ 371
AQVYR+AIDDA AGKPFD SLL TLEGLAHRGYTEGFLRRH H++ Q YEYGYSVS+RQQ
Sbjct: 302 AQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSDRQQ 361
Query: 372 FVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKGQPADIAPGNGH 431
FVGEFTG R+ LA V VKNKFS GDS+ELMTP+GNI FTLE M++ KG+ IAPG+G+
Sbjct: 362 FVGEFTGERKGDLAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPIAPGDGY 421
Query: 432 IMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEK 463
++LP+P+++++ Y LL+RN +G +RNPH K
Sbjct: 422 TVWLPVPQDLELNYALLMRNFSGETTRNPHGK 453
>ref|NP_456696.1| (NC_003198) putative protease [Salmonella enterica subsp. enterica
serovar Typhi]
ref|NP_461080.1| (NC_003197) putative protease [Salmonella typhimurium LT2]
gb|AAL21039.1| (AE008795) putative protease [Salmonella typhimurium LT2]
emb|CAD02515.1| (AL627273) putative protease [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 453
Score = 785 bits (2026), Expect = 0.0
Identities = 376/452 (83%), Positives = 415/452 (91%)
Query: 12 FTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAHALGKR 71
F PELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENL LGI EAHALGK+
Sbjct: 2 FKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKK 61
Query: 72 FYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANA 131
FYVVVNIAPHN+KLKTF+RDLKPV+EMGPDALIMSDPGLIM+VR+ FP M IHLSVQANA
Sbjct: 62 FYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPAMPIHLSVQANA 121
Query: 132 VNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSG 191
VNWATVKFWQQMGLTRVILSRELSLEEI EIR QVP+ME+E+FVHGALCMAYSGRCLLSG
Sbjct: 122 VNWATVKFWQQMGLTRVILSRELSLEEIEEIRQQVPDMEIEIFVHGALCMAYSGRCLLSG 181
Query: 192 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFV 251
YINKRDPNQGTCTNACRWEYNVQEGKED VGNIVH H+PI V+NVEPTLGIGAPTDKVF+
Sbjct: 182 YINKRDPNQGTCTNACRWEYNVQEGKEDVVGNIVHKHEPIPVQNVEPTLGIGAPTDKVFM 241
Query: 252 IEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCART 311
IEEAQRPGEYMTA EDEHGTYIMNSKDLRAI HVERLT++GVHSLKIEGRTKSFYYCART
Sbjct: 242 IEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCART 301
Query: 312 AQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTYEYGYSVSERQQ 371
AQVYR+AIDDA AGKPFDP+LL TLEGLAHRGYTEGFLRRH H++ Q YEYGYSVSERQQ
Sbjct: 302 AQVYRKAIDDAAAGKPFDPTLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSERQQ 361
Query: 372 FVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKGQPADIAPGNGH 431
FVGEFTG R+ LA V VKNKFS GDS+ELMTP+GNI FTLE M++ KG +APG+G+
Sbjct: 362 FVGEFTGERKGQLAAVAVKNKFSVGDSLELMTPQGNINFTLEQMENAKGDAMPVAPGDGY 421
Query: 432 IMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEK 463
+++P+P+++ ++Y LL+RN +G ++RNPH K
Sbjct: 422 TVWMPVPQDVTLDYALLMRNFSGESTRNPHAK 453
>ref|NP_288589.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_310916.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG57144.1|AE005435_2 (AE005435) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB36312.1| (AP002560) hypothetical protein [Escherichia coli O157:H7]
Length = 453
Score = 784 bits (2024), Expect = 0.0
Identities = 376/452 (83%), Positives = 416/452 (91%)
Query: 12 FTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAHALGKR 71
F PELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENL LGI EAHALGK+
Sbjct: 2 FKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKK 61
Query: 72 FYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANA 131
FYVVVNIAPHN+KLKTF+RDLKPV+EMGPDALIMSDPGLIM+VR+ FP+M IHLSVQANA
Sbjct: 62 FYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQANA 121
Query: 132 VNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSG 191
VNWATVKFWQQMGLTRVILSRELSLEEI EIR QVP+ME+E+FVHGALCMAYSGRCLLSG
Sbjct: 122 VNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLSG 181
Query: 192 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFV 251
YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVH ++PI V+NVEPTLGIGAPTDKVF+
Sbjct: 182 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVFM 241
Query: 252 IEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCART 311
IEEAQRPGEYMTA EDEHGTYIMNSKDLRAI HVERLT++GVHSLKIEGRTKSFYYCART
Sbjct: 242 IEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCART 301
Query: 312 AQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTYEYGYSVSERQQ 371
AQVYR+AIDDA AGKPFD SLL TLEGLAHRGYTEGFLRRH H++ Q YEYGYSVS+RQQ
Sbjct: 302 AQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSDRQQ 361
Query: 372 FVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKGQPADIAPGNGH 431
FVGEFTG R+ LA V VKNKFS GDS+ELMTP+GNI FTLE M++ KG+ +APG+G+
Sbjct: 362 FVGEFTGERKGDLAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPVAPGDGY 421
Query: 432 IMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEK 463
++LP+P+++++ Y LL+RN +G +RNPH K
Sbjct: 422 TVWLPVPQDLELNYALLMRNFSGETTRNPHGK 453
>ref|NP_245170.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK02317.1| (AE006057) unknown [Pasteurella multocida]
Length = 456
Score = 748 bits (1931), Expect = 0.0
Identities = 354/453 (78%), Positives = 400/453 (88%), Gaps = 1/453 (0%)
Query: 12 FTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAHALGKR 71
FTPELLSPAG+LKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNH NL +GI EAHALGK+
Sbjct: 4 FTPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLKIGIDEAHALGKK 63
Query: 72 FYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANA 131
FYVVVNIAPHNSKLKTF+RDL+PVI MGPDALIMSDPGLIM+VR+ FP M IHLSVQANA
Sbjct: 64 FYVVVNIAPHNSKLKTFIRDLEPVIAMGPDALIMSDPGLIMLVREHFPDMAIHLSVQANA 123
Query: 132 VNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSG 191
VNWA+VKFW+QMGLTRVILSRELSL+EIAEIR QVPEME+EVFVHGALCMAYSGRCLLSG
Sbjct: 124 VNWASVKFWKQMGLTRVILSRELSLDEIAEIRQQVPEMEIEVFVHGALCMAYSGRCLLSG 183
Query: 192 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFV 251
YINKRDPNQGTCTNACRWEY+V E KED++GNIV++ + I VKNV PTLG G T KVF+
Sbjct: 184 YINKRDPNQGTCTNACRWEYSVTEAKEDEIGNIVNVGEEIPVKNVAPTLGEGDTTSKVFL 243
Query: 252 IEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCART 311
+ E+QRP E M+A EDEHGTYIMNSKDLRA+QHVE+LT LGVHSLKIEGRTKSFYYCART
Sbjct: 244 LAESQRPEEQMSAFEDEHGTYIMNSKDLRAVQHVEKLTALGVHSLKIEGRTKSFYYCART 303
Query: 312 AQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTYEYGYSVSERQQ 371
AQVYR+AIDDAVAGKPFD SL+ TLE LAHRGYTEGFLRRH H+E Q Y+YGYS+SERQQ
Sbjct: 304 AQVYRKAIDDAVAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQNYDYGYSISERQQ 363
Query: 372 FVGEFTGVRRE-GLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKGQPADIAPGNG 430
FVGEFTG R E G+AEV VKNKF GD VE+MTPKGNI F +E M ++K + + G+G
Sbjct: 364 FVGEFTGKRNEQGMAEVAVKNKFLLGDEVEMMTPKGNIVFKIERMLNRKNENVEAGLGDG 423
Query: 431 HIMYLPIPEEIDVEYGLLIRNLNGTNSRNPHEK 463
H ++L +PE++ ++Y LL+RNL TN+R PH+K
Sbjct: 424 HFVFLDVPEDVQLDYALLMRNLVNTNTRQPHQK 456
>ref|NP_438581.1| (NC_000907) protease, putative [Haemophilus influenzae Rd]
sp|P44700|YEGQ_HAEIN Putative protease HI0419
pir||G64066 collagenase prtC homolog - Haemophilus influenzae (strain Rd KW20)
gb|AAC22077.1| (U32725) protease, putative [Haemophilus influenzae Rd]
Length = 460
Score = 740 bits (1911), Expect = 0.0
Identities = 349/454 (76%), Positives = 397/454 (86%), Gaps = 4/454 (0%)
Query: 12 FTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAHALGKR 71
F PELLSPAG+LKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNH NL +GI EAH+LGK+
Sbjct: 5 FKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLKIGIDEAHSLGKK 64
Query: 72 FYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANA 131
FYVVVNIAPHNSKLKTF++DL+PVI+M PDALIMSDPGLIM+VR+ FP +DIHLSVQANA
Sbjct: 65 FYVVVNIAPHNSKLKTFIKDLQPVIDMKPDALIMSDPGLIMLVRENFPNIDIHLSVQANA 124
Query: 132 VNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSG 191
VNWATVKFW+QMGLTRVILSRELS++EIAEIR QVP++ELE+FVHGALCMAYSGRCLLSG
Sbjct: 125 VNWATVKFWKQMGLTRVILSRELSIDEIAEIRQQVPDIELEIFVHGALCMAYSGRCLLSG 184
Query: 192 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQP---IAVKNVEPTLGIGAPTDK 248
YINKRDPNQGTCTNACRWEY ++EG DDVGNIV P I VKNV PTLG GA TDK
Sbjct: 185 YINKRDPNQGTCTNACRWEYKMEEGTTDDVGNIVPKIDPAQQIEVKNVAPTLGEGAVTDK 244
Query: 249 VFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYC 308
VF+ E+Q+P E MTA ED+HGTY MNSKDLRA+QHVE+LT LGVHSLKIEGRTKSFYYC
Sbjct: 245 VFLYTESQKPDEQMTAFEDKHGTYFMNSKDLRAVQHVEKLTALGVHSLKIEGRTKSFYYC 304
Query: 309 ARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTYEYGYSVSE 368
ARTAQVYR+AIDDA AGKPFD SL+ TLE LAHRGYTEGFLRRH H+E Q YEYGYS+S+
Sbjct: 305 ARTAQVYRKAIDDAAAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQNYEYGYSISD 364
Query: 369 RQQFVGEFTGVRRE-GLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKGQPADIAP 427
RQQFVGEFTG R E G+AEV VKNKF GD+VE+MTP+GNI F +E M ++K + D A
Sbjct: 365 RQQFVGEFTGKRNEQGMAEVAVKNKFLLGDNVEMMTPQGNINFKIEKMLNRKNETVDAAL 424
Query: 428 GNGHIMYLPIPEEIDVEYGLLIRNLNGTNSRNPH 461
G+GH ++L +P++I++ Y LL+RNL TN+RNPH
Sbjct: 425 GDGHFVFLNVPQDINLNYALLMRNLVNTNTRNPH 458
>ref|NP_230366.1| (NC_002505) protease, putative [Vibrio cholerae]
pir||F82288 probable proteinase (EC 3.4.-.-) VC0717 [imported] - Vibrio
cholerae (group O1 strain N16961)
gb|AAF93882.1| (AE004158) protease, putative [Vibrio cholerae]
Length = 466
Score = 709 bits (1829), Expect = 0.0
Identities = 349/465 (75%), Positives = 390/465 (83%), Gaps = 8/465 (1%)
Query: 7 TTERPFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAH 66
TT + F PELLSPAG+LKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENL +GI EAH
Sbjct: 2 TTPKTFVPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAH 61
Query: 67 ALGKRFYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLS 126
ALGK+FYVV NI PHNSKLKTF+RDLKPVI+MGPDALIMSDPGLIMMVR+ FP M IHLS
Sbjct: 62 ALGKKFYVVCNIQPHNSKLKTFIRDLKPVIDMGPDALIMSDPGLIMMVREEFPHMPIHLS 121
Query: 127 VQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGR 186
VQANAVNWATVKFW G+ RVI+SRELSLEEI EIR + P E+EVFVHGALCMAYSGR
Sbjct: 122 VQANAVNWATVKFWASQGVERVIVSRELSLEEIEEIREKCPNTEIEVFVHGALCMAYSGR 181
Query: 187 CLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQP-----IAVKNVEP--T 239
CLLSGYINKRDPNQGTCTNACRWEY V+ KED+ G IV P I V+N P T
Sbjct: 182 CLLSGYINKRDPNQGTCTNACRWEYKVEAAKEDEAGQIVEQFDPNAAQAIEVQNERPDTT 241
Query: 240 LGIGAPTDKVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIE 299
+G G P D V ++ E+ RP E M A EDEHGTYIMNSKDLRA+QHVERLTQ+GVHSLKIE
Sbjct: 242 IGAGKPIDDVVLLSESHRPDEKMAAFEDEHGTYIMNSKDLRAVQHVERLTQMGVHSLKIE 301
Query: 300 GRTKSFYYCARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQT 359
GRTKSFYYCARTAQVYR+AIDDAVAGKPFD SL+TTLE LAHRGYTEGFLRRH H+ Q
Sbjct: 302 GRTKSFYYCARTAQVYRKAIDDAVAGKPFDDSLMTTLESLAHRGYTEGFLRRHTHDAYQN 361
Query: 360 YEYGYSVSERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKK 419
Y+YGYSVS+ QQFVGEFTG RR +AEV VKNKF GDS+ELMTPKGN+ FTLE+M+++K
Sbjct: 362 YDYGYSVSDTQQFVGEFTGKRRGAMAEVEVKNKFVLGDSLELMTPKGNVIFTLEAMENRK 421
Query: 420 GQPADIAPGNGHIMYLPIPEEIDVEYGLLIRNL-NGTNSRNPHEK 463
G+ D A GNGH +Y+P+PEE+D+ Y LL+RNL G ++RNP K
Sbjct: 422 GEATDDAKGNGHFVYIPVPEELDLSYALLMRNLVQGQDTRNPTGK 466
>ref|NP_254127.1| (NC_002516) probable peptidase [Pseudomonas aeruginosa]
pir||C82967 probable peptidase PA5440 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08825.1|AE004956_9 (AE004956) probable peptidase [Pseudomonas aeruginosa]
Length = 464
Score = 680 bits (1755), Expect = 0.0
Identities = 337/454 (74%), Positives = 386/454 (84%), Gaps = 10/454 (2%)
Query: 8 TERPFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGIQEAHA 67
T PELL PAGTLK+MRYAFAYGADAVYAGQPRYSLRVRNN+F+H LA GI EAHA
Sbjct: 2 TATTLRPELLCPAGTLKSMRYAFAYGADAVYAGQPRYSLRVRNNDFDHAQLAEGIAEAHA 61
Query: 68 LGKRFYVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSV 127
LGKRFYVVVNIAPHN+KLKTFLRDL+PV+ MGPDALIMSDPGLIM+VR FPQM IHLSV
Sbjct: 62 LGKRFYVVVNIAPHNAKLKTFLRDLEPVVAMGPDALIMSDPGLIMLVRQHFPQMPIHLSV 121
Query: 128 QANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRC 187
QANAVNWA V+FW+Q GLTRVILSRELSLEEI EIR QVP+MELEVFVHGALCMAYSGRC
Sbjct: 122 QANAVNWAAVQFWRQQGLTRVILSRELSLEEIEEIRQQVPDMELEVFVHGALCMAYSGRC 181
Query: 188 LLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTD 247
LLSGYIN+RDPNQGTCTNACRWEY EG+ED++GN+V EPTLG GAPT+
Sbjct: 182 LLSGYINRRDPNQGTCTNACRWEYKAVEGREDELGNVV---------AREPTLGRGAPTE 232
Query: 248 KVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYY 307
+VF++EE RPGE M A EDEHGTYIMNSKDLRA+QHVERL ++GVHSLKIEGRTKS YY
Sbjct: 233 QVFLLEEGNRPGEPMAAFEDEHGTYIMNSKDLRAVQHVERLARIGVHSLKIEGRTKSHYY 292
Query: 308 CARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTYEYGYSVS 367
ARTAQVYR+AIDDA AGKPFD L+ TLE LAHRGYTEGFLRRHVH+E Q Y++G+S+S
Sbjct: 293 VARTAQVYRQAIDDAAAGKPFDRGLMDTLESLAHRGYTEGFLRRHVHDEYQNYQHGHSLS 352
Query: 368 ERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKGQPADIAP 427
ERQQFVGE TG RR+GLAEV VKN+F RGDSVELMTP+GN+ +E +++ G+ ++AP
Sbjct: 353 ERQQFVGELTGERRDGLAEVEVKNRFQRGDSVELMTPRGNLSLRVEDLRNAAGEAIEVAP 412
Query: 428 GNGHIMYLPIPEEIDVEYGLLIRNLN-GTNSRNP 460
GNGH++YL +PE +D+ Y LL+R+L G ++R P
Sbjct: 413 GNGHVVYLALPEGLDLCYALLMRDLQPGQDTRQP 446
>ref|NP_284630.1| (NC_003116) probable protease [Neisseria meningitidis Z2491]
pir||C81820 probable proteinase NMA1923 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB85144.1| (AL162757) probable protease [Neisseria meningitidis Z2491]
Length = 451
Score = 526 bits (1354), Expect = e-148
Identities = 267/453 (58%), Positives = 329/453 (71%), Gaps = 19/453 (4%)
Query: 14 PELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNH-ENLALGIQEAHALGKRF 72
PELL PAG L+ MR A+ YGADAVYAG PRYSLR RNNEF + L GI+EAH K+F
Sbjct: 4 PELLLPAGGLERMRTAYDYGADAVYAGSPRYSLRARNNEFAKLDVLEQGIKEAHERNKKF 63
Query: 73 YVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANAV 132
++ VN PHNSKLKTF+ D++P+I M PDALIM+DPGLIM VR+ +P+M IHLSVQAN
Sbjct: 64 FLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLIMTVREKWPEMPIHLSVQANTT 123
Query: 133 NWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSGY 192
N+ VKFWQ +G+ R+ILSRELS+EEIAEIR Q P++ELEVF+HGALC+AYSGRCLLSGY
Sbjct: 124 NYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDIELEVFIHGALCIAYSGRCLLSGY 183
Query: 193 INKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIH-------QPIAVKNVEPTLGIGAP 245
N RDPNQGTCTN+CRW+Y V E+D G+ + Q A +N E GI
Sbjct: 184 FNHRDPNQGTCTNSCRWDYKVHNATENDAGDAQLLQGFNFEKAQEEANQNFE---GINGQ 240
Query: 246 -----TDKVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEG 300
DKVF+IEE+ RPGE M EDEHGTYIMNSKDLR I+ VE+L ++GV SLK+EG
Sbjct: 241 KRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNSKDLRGIEVVEKLAKIGVDSLKVEG 300
Query: 301 RTKSFYYCARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTY 360
RTKS YY AR AQ YR+AIDDAVAG+PFD SLL+ LEGLA+RGYT GFL RH ++ Q Y
Sbjct: 301 RTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLSELEGLANRGYTSGFLERHQTQDYQNY 360
Query: 361 EYGYSVSERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKG 420
G+S +++ Q+VG T + + G A + VKN+F+ GDS+E++ P GN LE M +KG
Sbjct: 361 LSGHSTAKQSQYVGHVTEIDKNGWATIEVKNRFAVGDSLEIIHPNGNQTIKLEQMA-RKG 419
Query: 421 QPADIAPGNGHIMYLPIPEEIDVEYGLLIRNLN 453
QP D+APGNG + + IP+ E L+ R LN
Sbjct: 420 QPVDVAPGNG--IQVKIPDMQGKEKALIARVLN 450
>ref|NP_274669.1| (NC_003112) protease, putative [Neisseria meningitidis MC58]
pir||B81056 proteinase, probable NMB1664 [imported] - Neisseria meningitidis
(group B strain MD58)
gb|AAF42013.1| (AE002517) protease, putative [Neisseria meningitidis MC58]
Length = 451
Score = 519 bits (1337), Expect = e-146
Identities = 266/453 (58%), Positives = 325/453 (71%), Gaps = 19/453 (4%)
Query: 14 PELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNH-ENLALGIQEAHALGKRF 72
PELL PAG L+ MR A+ YGADAVYAG PRYSLR RNNEF + L GI+EAH K+F
Sbjct: 4 PELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFAKLDVLEQGIKEAHERNKKF 63
Query: 73 YVVVNIAPHNSKLKTFLRDLKPVIEMGPDALIMSDPGLIMMVRDAFPQMDIHLSVQANAV 132
++ VN PHNSKLKTF+ D++P+I M PDALIM+DPGLIM VR+ +P+M IHLSVQAN
Sbjct: 64 FLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLIMTVREKWPEMPIHLSVQANTT 123
Query: 133 NWATVKFWQQMGLTRVILSRELSLEEIAEIRAQVPEMELEVFVHGALCMAYSGRCLLSGY 192
N+ VKFWQ +G+ R+ILSRELS+EEIAEIR + P++ELEVF+HGALC+AYSGRCLLSGY
Sbjct: 124 NYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDIELEVFIHGALCIAYSGRCLLSGY 183
Query: 193 INKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHIH-------QPIAVKNVEPTLGIGAP 245
N RDPNQGTCTN+CRW+Y V E D G+ + Q A +N E GI
Sbjct: 184 FNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLLQGFNFEKAQEEANQNFE---GINGQ 240
Query: 246 -----TDKVFVIEEAQRPGEYMTASEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEG 300
DKVF+IEE+ RPGE M EDEHGTYIMNSKDLR I+ VE+L ++GV SLK+EG
Sbjct: 241 KRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNSKDLRGIEVVEKLAKIGVDSLKVEG 300
Query: 301 RTKSFYYCARTAQVYRRAIDDAVAGKPFDPSLLTTLEGLAHRGYTEGFLRRHVHEEQQTY 360
RTKS YY AR AQ YR+AIDDAVAG+PFD SLL+ LEGLA+RGYT GFL RH ++ Q Y
Sbjct: 301 RTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLSELEGLANRGYTSGFLERHQTQDYQNY 360
Query: 361 EYGYSVSERQQFVGEFTGVRREGLAEVLVKNKFSRGDSVELMTPKGNIQFTLESMQDKKG 420
G+S +++ Q+VG T + G A V VKN+F+ DS+E++ P GN LE M +KG
Sbjct: 361 LTGHSTAKQSQYVGHVTEIDENGWATVEVKNRFAVSDSLEIIHPSGNQTIKLEQMT-RKG 419
Query: 421 QPADIAPGNGHIMYLPIPEEIDVEYGLLIRNLN 453
QP D+APGNG + + IP E L+ R LN
Sbjct: 420 QPVDVAPGNG--IQVKIPNMQGKEKALIARVLN 450
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
Posted date: Feb 4, 2002 12:54 AM
Number of letters in database: 271,728,450
Number of sequences in database: 863,058
Lambda K H
0.318 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,096,107
Number of Sequences: 863058
Number of extensions: 10895362
Number of successful extensions: 26413
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 26129
Number of HSP's gapped (non-prelim): 152
length of query: 464
length of database: 271,728,450
effective HSP length: 123
effective length of query: 341
effective length of database: 165,572,316
effective search space: 56460159756
effective search space used: 56460159756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)