BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.RID: 1037801260-026871-23752
Query= gi|15598908|ref|NP_252402.1| hypothetical protein [Pseudomonas aeruginosa PA01] (620 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,241,201 sequences; 395,164,443 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQsScore E Sequences producing significant alignments: (bits) Value ref|NP_252402.1| hypothetical protein [Pseudomonas aerugino... 1151 0.0 gb|ZP_00022954.1| hypothetical protein [Ralstonia metallidu... 388 e-107 gb|ZP_00023109.1| hypothetical protein [Ralstonia metallidu... 45 9e-04 gb|ZP_00109339.1| hypothetical protein [Nostoc punctiforme] 42 0.008 sp|O32434|PPOX_PROFR PROTOPORPHYRINOGEN OXIDASE (PPO) >gi|2... 42 0.009 gb|ZP_00094179.1| hypothetical protein [Novosphingobium aro... 42 0.011 ref|NP_486866.1| hypothetical protein [Nostoc sp. PCC 7120]... 42 0.012 ref|NP_218371.1| hypothetical protein Rv3854c [Mycobacteriu... 42 0.012 gb|ZP_00011075.1| hypothetical protein [Rhodopseudomonas pa... 41 0.016 ref|NP_301173.1| putative monooxygenase [Mycobacterium lepr... 41 0.022 ref|NP_541269.1| AMINOBUTYRALDEHYDE DEHYDROGENASE [Brucella... 41 0.024 sp|Q52671|SOXB_RHOCA Sarcosine oxidase beta subunit (Sarcos... 40 0.036 ref|NP_108265.1| hypothetical protein [Mesorhizobium loti] ... 40 0.037 ref|NP_300945.1| protoporphyrinogen oxidase [Chlamydophila ... 40 0.040 ref|NP_225083.1| protoporphyrinogen Oxidase [Chlamydophila ... 40 0.040 gb|ZP_00004203.1| hypothetical protein [Rhodobacter sphaero... 40 0.049 gb|ZP_00040586.1| hypothetical protein [Xylella fastidiosa ... 39 0.070 ref|NP_231328.1| trimethylamine-N-oxide reductase [Vibrio c... 39 0.099 ref|NP_347541.1| Uncharacterized NAD(FAD)-dependent dehydro... 38 0.16 gb|ZP_00088050.1| hypothetical protein [Pseudomonas fluores... 38 0.16 gb|ZP_00065256.1| hypothetical protein [Microbulbifer degra... 38 0.16 ref|NP_104168.1| hypothetical protein [Mesorhizobium loti] ... 38 0.18 ref|NP_354950.1| AGR_C_3599p [Agrobacterium tumefaciens] >g... 38 0.20 gb|ZP_00113830.1| hypothetical protein [Prochlorococcus mar... 38 0.20 gb|ZP_00093477.1| hypothetical protein [Novosphingobium aro... 37 0.23 ref|NP_242714.1| BH1848~unknown conserved protein in others... 37 0.26 gb|ZP_00010624.1| hypothetical protein [Rhodopseudomonas pa... 37 0.29 gb|ZP_00038772.1| hypothetical protein [Xylella fastidiosa ... 37 0.31 gb|ZP_00084365.1| hypothetical protein [Pseudomonas fluores... 37 0.34 gb|ZP_00104962.1| hypothetical protein [Prochlorococcus mar... 37 0.43 gb|ZP_00056691.1| hypothetical protein [Thermobifida fusca] 37 0.44 gb|ZP_00005839.1| hypothetical protein [Rhodobacter sphaero... 36 0.54 ref|NP_104735.1| phytoene dehydrogenase [Mesorhizobium loti... 36 0.57 sp|Q01331|CRTY_ERWHE Lycopene cyclase >gi|2121040|pir||S529... 36 0.58 gb|AAK01510.1| aromatic-ring hyroxylase [Pseudomonas aerugi... 36 0.59 gb|ZP_00121594.1| hypothetical protein [Bifidobacterium lon... 36 0.64 ref|NP_220264.1| protoporphyrinogen Oxidase [Chlamydia trac... 36 0.64 gb|ZP_00045301.1| hypothetical protein [Magnetococcus sp. M... 36 0.65 ref|NP_695801.1| thioredoxin reductase-like protein [Bifido... 36 0.65 ref|NP_636022.1| flavoprotein-ubiquinone oxidoreductase [Xa... 36 0.67 ref|NP_681164.1| protoporphyrinogen oxidase [Thermosynechoc... 36 0.67 emb|CAC01605.1| putative halogenase [Anabaena sp. 90] 36 0.68 ref|NP_636705.1| dehydrogenase [Xanthomonas campestris pv. ... 36 0.69 ref|NP_296504.1| protoporphyrinogen oxidase [Chlamydia muri... 36 0.76 ref|NP_714380.1| L-amino acid oxidase [Leptospira interroga... 36 0.77 ref|NP_298587.1| electron transfer flavoprotein ubiquinone ... 36 0.79 ref|NP_464410.1| similar to protoporphyrinogen IX and copro... 35 0.80 ref|NP_470224.1| similar to protoporphyrinogen IX and copro... 35 0.80 gb|ZP_00094878.1| hypothetical protein [Novosphingobium aro... 35 0.82 gb|ZP_00007697.1| hypothetical protein [Rhodobacter sphaero... 35 0.82 gb|ZP_00125470.1| hypothetical protein [Pseudomonas syringa... 35 0.89 ref|NP_465442.1| similar to unknown proteins [Listeria mono... 35 0.89 ref|NP_104292.1| sarcosine oxidase beta subunit [Mesorhizob... 35 0.92 ref|NP_471366.1| similar to unknown proteins [Listeria inno... 35 0.92 ref|NP_215079.1| hypothetical protein Rv0565c [Mycobacteriu... 35 1.0 gb|ZP_00036855.1| hypothetical protein [Enterococcus faecium] 35 1.0 ref|NP_335000.1| monooxygenase, flavin-binding family [Myco... 35 1.0 gb|AAN65215.1|AF329398_5 sarcosine oxidase beta subunit [St... 35 1.1 gb|ZP_00052264.1| hypothetical protein [Magnetospirillum ma... 35 1.1 ref|NP_214383.1| protoporphyrinogen oxidase [Aquifex aeolic... 35 1.1 gb|ZP_00034740.1| hypothetical protein [Burkholderia fungorum] 35 1.2 ref|NP_436641.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizob... 35 1.2 emb|CAA06794.1| trimethylamine-N-oxide reductase [Shewanell... 35 1.2 ref|NP_354018.1| AGR_C_1825p [Agrobacterium tumefaciens] >g... 35 1.3 ref|NP_716855.1| trimethylamine-N-oxide reductase [Shewanel... 35 1.3 gb|ZP_00014406.1| hypothetical protein [Rhodospirillum rubrum] 35 1.3 gb|ZP_00066370.1| hypothetical protein [Microbulbifer degra... 35 1.4 ref|NP_357201.1| AGR_L_2836p [Agrobacterium tumefaciens] >g... 35 1.4 ref|NP_421401.1| amine oxidase, flavin-containing [Caulobac... 35 1.5 ref|NP_241537.1| BH0671~unknown conserved protein in others... 35 1.6 ref|NP_244274.1| thioredoxin reductase [Bacillus halodurans... 35 1.6 gb|ZP_00096160.1| hypothetical protein [Novosphingobium aro... 35 1.7 ref|NP_629800.1| putative oxidoreductase [Streptomyces coel... 34 1.8 ref|NP_718855.1| flavocytochrome c flavin subunit [Shewanel... 34 1.9 gb|ZP_00012783.1| hypothetical protein [Rhodopseudomonas pa... 34 1.9 gb|ZP_00098875.1| hypothetical protein [Desulfitobacterium ... 34 2.0 gb|ZP_00116312.1| hypothetical protein [Synechococcus sp. W... 34 2.0 ref|NP_437385.1| putative FAD-dependent glycerol-3-phosphat... 34 2.1 ref|NP_250988.1| probable oxidoreductase [Pseudomonas aerug... 34 2.1 gb|AAF72726.1|AF264024_2 putative electron transfer flavopr... 34 2.2 gb|ZP_00074529.1| hypothetical protein [Trichodesmium eryth... 34 2.3 ref|NP_661546.1| carotenoid isomerase, putative [Chlorobium... 34 2.4 gb|ZP_00058787.1| hypothetical protein [Thermobifida fusca] 34 2.6 gb|ZP_00052504.1| hypothetical protein [Magnetospirillum ma... 34 2.7 gb|ZP_00057328.1| hypothetical protein [Thermobifida fusca] 34 2.8 ref|NP_639340.1| halogenase [Xanthomonas campestris pv. cam... 34 3.0 ref|NP_719167.1| flavocytochrome c flavin subunit [Shewanel... 33 3.0 emb|CAD31288.1| PROBABLE SARCOSINE OXIDASE BETA SUBUNIT PRO... 33 3.1 gb|ZP_00046548.1| hypothetical protein [Lactobacillus gasseri] 33 3.2 ref|NP_350178.1| Uncharacterized FAD-dependent dehydrogenas... 33 3.3 ref|NP_631070.1| putative oxidoreductase. [Streptomyces coe... 33 3.4 ref|NP_228678.1| thioredoxin reductase [Thermotoga maritima... 33 3.6 ref|NP_252114.1| hypothetical protein [Pseudomonas aerugino... 33 3.6 ref|NP_696410.1| probable UDP-galactopyranose mutase [Bifid... 33 3.7 ref|NP_294854.1| protoporphyrinogen oxidase [Deinococcus ra... 33 3.8 ref|NP_356758.1| AGR_L_1938p [Agrobacterium tumefaciens] >g... 33 3.9 emb|CAD54733.1| flavin-binding monooxygenase [uncultured Bu... 33 3.9 gb|ZP_00121208.1| hypothetical protein [Bifidobacterium lon... 33 4.1 ref|NP_244738.1| Rieske [2Fe-2S] iron-sulfur protein [Bacil... 33 4.5 ref|NP_641712.1| dehydrogenase [Xanthomonas axonopodis pv. ... 33 4.7Alignments >ref|NP_252402.1| hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83182 hypothetical protein PA3713 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG07100.1|AE004790_5 hypothetical protein [Pseudomonas aeruginosa PA01] Length = 620 Score = 1151 bits (2977), Expect = 0.0 Identities = 578/620 (93%), Positives = 578/620 (93%) Query: 1 MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRGSHPGAFEVAHQMGWEK 60 MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRGSHPGAFEVAHQMGWEK Sbjct: 1 MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRGSHPGAFEVAHQMGWEK 60 Query: 61 KTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQ 120 KTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQ Sbjct: 61 KTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQ 120 Query: 121 AGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAVFF 180 AGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAVFF Sbjct: 121 AGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAVFF 180 Query: 181 DKASFGVDKLVSGDPTPMVADEVPRDRLNARSWRAFIGDFPLSREDREALIALYESPRDY 240 DKASFGVDKLVSGDPTPMVADEVPRDRLNARSWRAFIGDFPLSREDREALIALYESPRDY Sbjct: 181 DKASFGVDKLVSGDPTPMVADEVPRDRLNARSWRAFIGDFPLSREDREALIALYESPRDY 240 Query: 241 LAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFSXXXXXXXXXXXXXXXX 300 LAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFS Sbjct: 241 LAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFSALGADALPAADAYAAG 300 Query: 301 XXXXXXLGLPQPSEEAQAEMDEPYIYHFPDGNASLARLMVRDLIPAVAPGRGMEDIVMAR 360 LGLPQPSEEAQAEMDEPYIYHFPDGNASLARLMVRDLIPAVAPGRGMEDIVMAR Sbjct: 301 FPGFDALGLPQPSEEAQAEMDEPYIYHFPDGNASLARLMVRDLIPAVAPGRGMEDIVMAR 360 Query: 361 FDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGRLHRVRGKHCVMACYNMMVPY 420 FDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGRLHRVRGKHCVMACYNMMVPY Sbjct: 361 FDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGRLHRVRGKHCVMACYNMMVPY 420 Query: 421 LLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYSRIKLDFPVDL 480 LLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYSRIKLDFPVDL Sbjct: 421 LLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYSRIKLDFPVDL 480 Query: 481 GSYRHPRDPRQPIGVHMVYVPTTPNAGMDARTQARVGRSKLYAMSFEQLEKDIRDQLQAM 540 GSYRHPRDPRQPIGVHMVYVPTTPNAGMDARTQARVGRSKLYAMSFEQLEKDIRDQLQAM Sbjct: 481 GSYRHPRDPRQPIGVHMVYVPTTPNAGMDARTQARVGRSKLYAMSFEQLEKDIRDQLQAM 540 Query: 541 LGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVGNVXXXXXXXX 600 LGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVGNV Sbjct: 541 LGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVGNVAIANSDAA 600 Query: 601 XXXXXXXXXXXXVRAVRELG 620 VRAVRELG Sbjct: 601 WDAYAHAAIDQAVRAVRELG 620>gb|ZP_00022954.1| hypothetical protein [Ralstonia metallidurans] Length = 712 Score = 388 bits (997), Expect = e-107 Identities = 269/602 (44%), Positives = 340/602 (56%), Gaps = 33/602 (5%) Query: 1 MTISRRDFLNGVALTIAAGLTPAEILRAAPG-GRYYPPALTGLRGSHPGAFEVAHQMGWE 59 MTI+RRDFLNG ALTIAAGL P +LRAA G YPPALTGLRG+HPG F +AH + E Sbjct: 103 MTITRRDFLNGTALTIAAGLAPTSVLRAAEAQGPAYPPALTGLRGNHPGTFTLAHSLARE 162 Query: 60 KKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPA-ARILVIENHDDFGGHAKRNE 118 + + E YDLVVVGGGI GLAAAWFY++R ARIL+++NHDDFGGHAKRNE Sbjct: 163 GAKY--PGVLARESYDLVVVGGGIGGLAAAWFYQQRFGGNARILILDNHDDFGGHAKRNE 220 Query: 119 FQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAV 178 F GRT++ YGGS + P+A + + LL G++L A D Y GL RAV Sbjct: 221 FTVRGRTLVTYGGSAEM-PPSANDNAAVRALLA--GLDLAPRIQARPGDDYARRGLGRAV 277 Query: 179 FFDKASFGVDKLVSGDPTPMVADEVPRD-RLNARSWRAFIGDFPLSREDREALIALYESP 237 FFD FG D+ ++GDP + D R AF+ PL DR+AL L + Sbjct: 278 FFDAEHFGRDQWLAGDPFAALVDARNAGVRPAPEDLGAFLNAAPLPPADRQALQRLAQGE 337 Query: 238 RDYLAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFSXXXXXXXXXXXXX 297 DYL+G + E + Y T Y +L + GL +++ + RS D Sbjct: 338 TDYLSGMAGEARARYAQSTRYAVFLREKAGLGLPGLRFLRSRSQD--------AYALDAD 389 Query: 298 XXXXXXXXXLGLPQPSEEAQAEMDEPYI-------YHFPDGNASLARLMVRDLIPAVAPG 350 +GLP + A +D P + FPDGNA+LAR + L+P VA Sbjct: 390 GITVAQAISIGLPAGAGMAAPAID-PRLGKSPASRLWFPDGNATLARALASKLVPGVAAA 448 Query: 351 RGMEDIVMARFDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGRLHRVRGKHCV 410 +G E IV ARFDYSKLD G+PVR+RLNSTA+++ V Y G L RV H V Sbjct: 449 QGQE-IVGARFDYSKLDREGNPVRIRLNSTAIAIEPDVRITRVTYGWQGNLQRVEAAHVV 507 Query: 411 MACYNMMVPYLLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYS 470 +A Y+MMVP++L L AL VK PLVYTKV L NW+A+ L I+APT+ YS Sbjct: 508 VAGYDMMVPFILPSLPVPAKAALRACVKAPLVYTKVALDNWRAFDALKTWRIHAPTMAYS 567 Query: 471 RIKLDFPVDLGSYRHPRDPRQPIGVHMVYVPTTPNAGMDARTQARVGRSKLYAMSFEQLE 530 DL P P+ +HM+YVPT P++GM AR + R GR+ L FE LE Sbjct: 568 --------DLWLESAPGGKDDPVVLHMLYVPTVPDSGMSARERFRAGRAFLLGTPFEVLE 619 Query: 531 KDIRDQLQAMLGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVG 590 +DIR QL ML GF RDI GITVNRW+HGYSY + L D+A + +E A VG Sbjct: 620 RDIRAQLDRMLAAGGFKSARDIQGITVNRWAHGYSYMPSGLAPDDANLQVALEQAGRGVG 679 Query: 591 NV 592 N+ Sbjct: 680 NI 681>gb|ZP_00023109.1| hypothetical protein [Ralstonia metallidurans] Length = 523 Score = 45.4 bits (106), Expect = 9e-04 Identities = 18/41 (43%), Positives = 29/41 (70%) Query: 72 EEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 E +D+++VG GISG+ +A+ R + P R +V+E+ D FGG Sbjct: 31 EHFDVIIVGAGISGVGSAYHMRTQCPGKRFVVLESKDSFGG 71>gb|ZP_00109339.1| hypothetical protein [Nostoc punctiforme] Length = 404 Score = 42.4 bits (98), Expect = 0.008 Identities = 19/44 (43%), Positives = 26/44 (59%) Query: 74 YDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRN 117 YD ++GGGI GL+ A +R+P ARILV+E + H N Sbjct: 2 YDFAIIGGGIVGLSTALALGKRYPNARILVLEKESQWAFHQTGN 45>sp|O32434|PPOX_PROFR PROTOPORPHYRINOGEN OXIDASE (PPO) dbj|BAA21909.1| protoporphyrinogen oxidase [Propionibacterium freudenreichii] Length = 527 Score = 42.0 bits (97), Expect = 0.009 Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 2/37 (5%) Query: 76 LVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 LVVVGGGI+GLAAAW R AR+ V+E+ D FGG Sbjct: 29 LVVVGGGITGLAAAWQGMAR--GARVSVVESDDHFGG 63>gb|ZP_00094179.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 526 Score = 42.0 bits (97), Expect = 0.011 Identities = 16/40 (40%), Positives = 28/40 (70%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 ++D+++VG GISG+ +AW +++ P +IE+ D FGG Sbjct: 31 DFDVLIVGAGISGIGSAWHLQDQCPDKTYAIIESKDTFGG 70>ref|NP_486866.1| hypothetical protein [Nostoc sp. PCC 7120] dbj|BAB74525.1| ORF_ID:alr2826~hypothetical protein [Nostoc sp. PCC 7120] Length = 404 Score = 41.6 bits (96), Expect = 0.012 Identities = 19/44 (43%), Positives = 25/44 (56%) Query: 74 YDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRN 117 YD +VGGGI GL+ +R+P ARILV+E + H N Sbjct: 2 YDFTIVGGGIVGLSTGMALGKRYPQARILVLEKESQWAFHQTGN 45>ref|NP_218371.1| hypothetical protein Rv3854c [Mycobacterium tuberculosis H37Rv] ref|NP_338522.1| monooxygenase, flavin-binding family [Mycobacterium tuberculosis CDC1551] pir||C70655 probable monooxygenase - Mycobacterium tuberculosis (strain H37RV) emb|CAB06212.1| hypothetical protein Rv3854c [Mycobacterium tuberculosis H37Rv] gb|AAK48336.1| monooxygenase, flavin-binding family [Mycobacterium tuberculosis CDC1551] Length = 489 Score = 41.6 bits (96), Expect = 0.012 Identities = 17/41 (41%), Positives = 26/41 (63%) Query: 72 EEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 E D+V+VG GISG++AAW ++R P ++E + GG Sbjct: 3 EHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGG 43>gb|ZP_00011075.1| hypothetical protein [Rhodopseudomonas palustris] Length = 513 Score = 41.2 bits (95), Expect = 0.016 Identities = 18/41 (43%), Positives = 26/41 (63%) Query: 72 EEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 E D+++VG GISG+ AA+ + P R +V+E D FGG Sbjct: 28 EHVDVLIVGAGISGIGAAYHLTTQCPGTRFVVLEAQDGFGG 68>ref|NP_301173.1| putative monooxygenase [Mycobacterium leprae] emb|CAC29573.1| putative monooxygenase [Mycobacterium leprae] Length = 494 Score = 40.8 bits (94), Expect = 0.022 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 71 EEEY-DLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 E EY D+V+VG GISG++AAW ++R P +++E GG Sbjct: 6 ETEYLDVVIVGAGISGVSAAWHLQDRCPNKSYVILEKRAGMGG 48>ref|NP_541269.1| AMINOBUTYRALDEHYDE DEHYDROGENASE [Brucella melitensis] ref|NP_700169.1| conserved hypothetical protein [Brucella suis 1330] gb|AAL53533.1| AMINOBUTYRALDEHYDE DEHYDROGENASE [Brucella melitensis] gb|AAN34174.1|AE014593_9 conserved hypothetical protein [Brucella suis 1330] Length = 410 Score = 40.8 bits (94), Expect = 0.024 Identities = 19/41 (46%), Positives = 24/41 (58%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 +YD V+GGGI GLA A +E P ARI+V+E H Sbjct: 3 DYDYCVIGGGIVGLATAKAVQEAEPGARIIVLEKESGLARH 43>sp|Q52671|SOXB_RHOCA Sarcosine oxidase beta subunit (Sarcosine oxidase subunit B) gb|AAB01814.1| sarcosine oxidase Length = 208 Score = 40.0 bits (92), Expect = 0.036 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 54 HQMGWEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 + GWEK + ++ YD++VVG G GLA A++ + H + +IE GG+ Sbjct: 16 YHSGWEKAWASPEP---KKRYDVIVVGAGGHGLATAYYLGKVHGIKNVAIIEKGWLGGGN 72 Query: 114 AKRNEFQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVEL 157 RN TI+ S LQ P+A E A+ L + L +L Sbjct: 73 TGRNT------TII---RSNYLQDPSAAIYEKARSLYEGLSQDL 107>ref|NP_108265.1| hypothetical protein [Mesorhizobium loti] dbj|BAB53726.1| hypothetical protein [Mesorhizobium loti] Length = 448 Score = 40.0 bits (92), Expect = 0.037 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 18/111 (16%) Query: 71 EEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQAGGRTI-LGY 129 ++ D+ +VG GISGL+AAW RH ++ + E GGH+ N AGG + G+ Sbjct: 10 DKPMDIAIVGSGISGLSAAWLLSTRH---KVSLFEADRRLGGHS--NTVDAGGTQVDTGF 64 Query: 130 GGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDF------YPGLGL 174 + PN L LGV K + +F Y G GL Sbjct: 65 IVYNEVTYPN------LTALFSYLGVRTKASDMSFAVSLDGGRFEYSGTGL 109>ref|NP_300945.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae J138] ref|NP_445515.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae AR39] pir||A81518 protoporphyrinogen oxidase CP0978 [imported] - Chlamydophila pneumoniae (strain AR39) gb|AAF38758.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae AR39] dbj|BAA99096.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae J138] Length = 435 Score = 40.0 bits (92), Expect = 0.040 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 77 VVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRN-----EFQAGGRTILGYGG 131 +++G GISGLAA W+ ++ P A ILV++ GG + F G + L G Sbjct: 5 IIIGAGISGLAAGWWLHKKFPQAEILVLDKEAYAGGFVRTESPQGFSFDLGPKGFLTRGD 64 Query: 132 SE 133 E Sbjct: 65 GE 66>ref|NP_225083.1| protoporphyrinogen Oxidase [Chlamydophila pneumoniae CWL029] pir||D72023 protoporphyrinogen oxidase - Chlamydophila pneumoniae (strain CWL029) gb|AAD19026.1| protoporphyrinogen Oxidase [Chlamydophila pneumoniae CWL029] Length = 435 Score = 40.0 bits (92), Expect = 0.040 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 77 VVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRN-----EFQAGGRTILGYGG 131 +++G GISGLAA W+ ++ P A ILV++ GG + F G + L G Sbjct: 5 IIIGAGISGLAAGWWLHKKFPQAEILVLDKEAYAGGFVRTESPQGFSFDLGPKGFLTRGD 64 Query: 132 SE 133 E Sbjct: 65 GE 66>gb|ZP_00004203.1| hypothetical protein [Rhodobacter sphaeroides] Length = 452 Score = 39.7 bits (91), Expect = 0.049 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%) Query: 54 HQMGWEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 H GWE+ + + YD++V+G G GLA A++ + + VIE GG+ Sbjct: 53 HHTGWERAWASPEP---KASYDVIVIGAGGHGLATAYYLGKNFGITNVAVIEKGWLGGGN 109 Query: 114 AKRNEFQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVEL 157 RN TI+ S LQ P+A E A+ L + L +L Sbjct: 110 TGRNT------TII---RSNYLQDPSAAIYEKARSLYETLSQDL 144>gb|ZP_00040586.1| hypothetical protein [Xylella fastidiosa Ann-1] Length = 450 Score = 39.3 bits (90), Expect = 0.070 Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 EYD+V VG G +GLA A ++ +PA + VIE GGH Sbjct: 19 EYDVVTVGAGPAGLAFAIRLKQLNPALSVCVIEKSSTIGGH 59>ref|NP_231328.1| trimethylamine-N-oxide reductase [Vibrio cholerae] pir||G82168 trimethylamine-N-oxide reductase VC1692 [imported] - Vibrio cholerae (group O1 strain N16961) gb|AAF94842.1| trimethylamine-N-oxide reductase [Vibrio cholerae] Length = 820 Score = 38.5 bits (88), Expect = 0.099 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 12/110 (10%) Query: 1 MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRGSHPGAFEVAHQMG--- 57 M I+RR FL GVA T AA + +L + + GSH GAF AH G Sbjct: 1 MAITRRSFLKGVATTSAASIIGPSLLTSVSAQAAETTGTWKVSGSHWGAFR-AHIYGGKV 59 Query: 58 WEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENH 107 E K ++D P E + GI G+ + R R+P R+ ++ H Sbjct: 60 QELKALELDTHPTE-------MLNGIQGILYS-PSRVRYPMVRLDWLKKH 101>ref|NP_347541.1| Uncharacterized NAD(FAD)-dependent dehydrogenase [Clostridium acetobutylicum] gb|AAK78881.1|AE007606_1 Uncharacterized NAD(FAD)-dependent dehydrogenase [Clostridium acetobutylicum] Length = 311 Score = 38.1 bits (87), Expect = 0.16 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 72 EEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 E +DLV+VGGGISGL AA ++ I++IE D GG Sbjct: 2 ENHDLVIVGGGISGLQAA-ISAKKSGVQDIVLIEAEDSLGG 41>gb|ZP_00088050.1| hypothetical protein [Pseudomonas fluorescens] Length = 490 Score = 37.7 bits (86), Expect = 0.16 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 25/158 (15%) Query: 71 EEEYDLVVVGGGISGLAAAWFYRERHPAA--RILVIENHDDFGGHAKRNEFQAGGRTILG 128 ++ +D+V++G G++GL AA R+ H A +LV+E D GG ++ +G + Sbjct: 46 DDVFDVVIIGAGLAGLTAA---RDLHLAGCESLLVLEARDRVGGRTLNHDLGSG---YIS 99 Query: 129 YGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAVFFDKASFGVD 188 G + + ++ A+ L E+ F + +D + G R K +FG D Sbjct: 100 EAGGQWIGPGQTAVADLAREL------EVGTFPSFYDGETVILGGDGRVAVDLKGTFGTD 153 Query: 189 KLVSGDPTPMVAD-------EVPR----DRLNARSWRA 215 + VS + + D + PR D+L+A W A Sbjct: 154 ESVSAKLSELSRDVPCGAPWKSPRVAELDKLSAGDWLA 191>gb|ZP_00065256.1| hypothetical protein [Microbulbifer degradans 2-40] Length = 545 Score = 37.7 bits (86), Expect = 0.16 Identities = 17/41 (41%), Positives = 25/41 (60%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 EYD+VVVG G +GL+AA ++ P + V+E + G H Sbjct: 7 EYDVVVVGAGPAGLSAACRLKQLQPDVSVCVVEKGSEVGAH 47>ref|NP_104168.1| hypothetical protein [Mesorhizobium loti] dbj|BAB49954.1| hypothetical protein [Mesorhizobium loti] Length = 461 Score = 37.7 bits (86), Expect = 0.18 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 68 LPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENH-DDFGGHAKRNEFQAGG 123 LP + E D+ +VG G +GL A++ ++ P+ RI VIE FG + + +GG Sbjct: 26 LPGDIEADVAIVGAGYTGLWTAYYLKKARPSLRIAVIEREFAGFGASGRNGGWLSGG 82>ref|NP_354950.1| AGR_C_3599p [Agrobacterium tumefaciens] ref|NP_532656.1| amine oxidase, flavin-containing [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87735.1| AGR_C_3599p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42972.1| amine oxidase, flavin-containing [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 457 Score = 37.7 bits (86), Expect = 0.20 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Query: 76 LVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEF 119 + +VG GISGL+AAW +RH + V E D GGH+ F Sbjct: 15 IAIVGTGISGLSAAWLLSKRHD---VTVFEAADRVGGHSNTVRF 55>gb|ZP_00113830.1| hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 362 Score = 37.7 bits (86), Expect = 0.20 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Query: 74 YDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHA---KRN--EFQAGGRTILG 128 YD++VVG GI GL AA +R R+LV+E H GG A +R F G G Sbjct: 13 YDVLVVGAGIGGLTAAALLAKR--GYRVLVVEQHYLPGGCASIFRRQGFTFDVGASLFFG 70 Query: 129 YG 130 +G Sbjct: 71 FG 72>gb|ZP_00093477.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 529 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQAGGRTILGYGGS 132 +YD+VV+G G +GL AA + + ++LV+E FGG E G + Sbjct: 3 QYDIVVMGAGHNGLTAAAYMAK--AGKKVLVLERKPHFGGGVSTRELLHPGFWHDEHSNV 60 Query: 133 ESLQSPNALYSEDAKHLLKRLGVE 156 + N + ED LL R G+E Sbjct: 61 HIMIQGNPMLREDELGLLSRFGLE 84>ref|NP_242714.1| BH1848~unknown conserved protein in others [Bacillus halodurans] dbj|BAB05567.1| BH1848~unknown conserved protein in others [Bacillus halodurans] Length = 498 Score = 37.4 bits (85), Expect = 0.26 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 69 PIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHA 114 P + YD+VV+G G+ GL+AA F + +LV+E H GG+A Sbjct: 5 PKKSSYDVVVIGAGMGGLSAATFLAQE--GYSVLVLERHYRAGGYA 48>gb|ZP_00010624.1| hypothetical protein [Rhodopseudomonas palustris] Length = 552 Score = 37.0 bits (84), Expect = 0.29 Identities = 16/41 (39%), Positives = 27/41 (65%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 E+D+V+VG G SGL+AA ++ +P ++V+E + G H Sbjct: 13 EFDVVIVGAGPSGLSAAIRLKQINPELSVVVVEKGSEVGAH 53>gb|ZP_00038772.1| hypothetical protein [Xylella fastidiosa Dixon] Length = 300 Score = 37.0 bits (84), Expect = 0.31 Identities = 18/41 (43%), Positives = 24/41 (58%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 EYD+V VG G +GLA A ++ +PA + VIE G H Sbjct: 19 EYDVVTVGAGPAGLAFAIRLKQLNPALSVCVIEKSSTIGAH 59>gb|ZP_00084365.1| hypothetical protein [Pseudomonas fluorescens] Length = 578 Score = 37.0 bits (84), Expect = 0.34 Identities = 15/36 (41%), Positives = 27/36 (75%) Query: 70 IEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIE 105 +E+EYD+VV+GGG +G AA +E++ R+L+++ Sbjct: 8 LEQEYDIVVIGGGTAGPMAAIKAKEKNKELRVLLVD 43>gb|ZP_00104962.1| hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1378] Length = 409 Score = 36.6 bits (83), Expect = 0.43 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 74 YDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAK-RNEFQAGG 123 YD+ ++GGGIS + F+ + RI +IEN + GG + RN G Sbjct: 29 YDIAIIGGGISSCVFSSFHLKNGYQGRIAIIENGRNLGGRSSTRNSISNSG 79>gb|ZP_00056691.1| hypothetical protein [Thermobifida fusca] Length = 480 Score = 36.6 bits (83), Expect = 0.44 Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 68 LPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRN 117 LP + +YD+ +VG G +GL A++ ++ P RI ++E G + RN Sbjct: 40 LPGDADYDVCIVGAGYTGLWTAYYLKKEQPDLRIAILEREFAGFGASGRN 89>gb|ZP_00005839.1| hypothetical protein [Rhodobacter sphaeroides] Length = 577 Score = 36.2 bits (82), Expect = 0.54 Identities = 16/41 (39%), Positives = 26/41 (63%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 EYD+V+VG G SGL+AA ++ P ++++E + G H Sbjct: 37 EYDVVIVGAGPSGLSAAIRLKQLDPDLSVVLLEKGSEVGAH 77>ref|NP_104735.1| phytoene dehydrogenase [Mesorhizobium loti] dbj|BAB50521.1| phytoene dehydrogenase [Mesorhizobium loti] Length = 521 Score = 36.2 bits (82), Expect = 0.57 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%) Query: 74 YDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQAGGRTILGYGGSE 133 +D +V+GGG +GL AA + ++LV+E + GG A+ EF G R S Sbjct: 4 FDAIVIGGGHNGLVAAATLAK--AGRKVLVLEAESEVGGAARTEEFAPGFRV------SS 55 Query: 134 SLQSPNALYSEDAKHL-LKRLGVELKRFETAFDTDFYPGLGLSR 176 N L+ + K L L+ G++ R DF P LS+ Sbjct: 56 IAHLLNRLHPDVVKTLELETHGLQFAR------ADFLPSAALSK 93>sp|Q01331|CRTY_ERWHE Lycopene cyclase pir||S52981 lycopene cyclase - Erwinia herbicola gb|AAA64980.1| lycopene cyclase [Pantoea agglomerans] Length = 386 Score = 36.2 bits (82), Expect = 0.58 Identities = 16/39 (41%), Positives = 26/39 (66%) Query: 75 DLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 DL++VGGG++ AW R+R+P +L+IE + GG+ Sbjct: 3 DLILVGGGLANGLIAWRLRQRYPQLNLLLIEAGEQPGGN 41>gb|AAK01510.1| aromatic-ring hyroxylase [Pseudomonas aeruginosa] Length = 508 Score = 36.2 bits (82), Expect = 0.59 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 68 LPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 LPI E D++++G G+SG+ AA + R P ++E+ + GG Sbjct: 7 LPI-EPLDVLIIGAGVSGIGAAAYLRRHQPHKVFAILESRERMGG 50>gb|ZP_00121594.1| hypothetical protein [Bifidobacterium longum DJO10A] Length = 661 Score = 35.8 bits (81), Expect = 0.64 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 5/40 (12%) Query: 74 YDLVVVGGGISGLAAA-WFYRERHPAARILVIENHDDFGG 112 YD+VV+GGG +GL A + R R+ R+L++E DDFGG Sbjct: 31 YDVVVIGGGPAGLTAGLYLARARY---RVLILEK-DDFGG 66>ref|NP_220264.1| protoporphyrinogen Oxidase [Chlamydia trachomatis] pir||A71476 probable protoporphyrinogen oxidase - Chlamydia trachomatis (serotype D, strain UW3/Cx) gb|AAC68340.1| protoporphyrinogen Oxidase [Chlamydia trachomatis] Length = 424 Score = 35.8 bits (81), Expect = 0.64 Identities = 14/36 (38%), Positives = 24/36 (66%) Query: 77 VVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 ++VG GI+GL+AAW+ +R P ++ ++E GG Sbjct: 5 LIVGSGIAGLSAAWWLHKRFPHVQLSILEKESRSGG 40>gb|ZP_00045301.1| hypothetical protein [Magnetococcus sp. MC-1] Length = 405 Score = 35.8 bits (81), Expect = 0.65 Identities = 18/40 (45%), Positives = 24/40 (60%) Query: 75 DLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHA 114 D +++G G+ GLA A R+RHP A I+V E G HA Sbjct: 7 DFLILGAGVIGLALALEARKRHPRATIVVAEKEAQPGLHA 46>ref|NP_695801.1| thioredoxin reductase-like protein [Bifidobacterium longum NCC2705] gb|AAN24437.1|AE014683_4 thioredoxin reductase-like protein [Bifidobacterium longum NCC2705] Length = 638 Score = 35.8 bits (81), Expect = 0.65 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 5/40 (12%) Query: 74 YDLVVVGGGISGLAAA-WFYRERHPAARILVIENHDDFGG 112 YD+VV+GGG +GL A + R R+ R+L++E DDFGG Sbjct: 8 YDVVVIGGGPAGLTAGLYLARARY---RVLILEK-DDFGG 43>ref|NP_636022.1| flavoprotein-ubiquinone oxidoreductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM39946.1| flavoprotein-ubiquinone oxidoreductase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 549 Score = 35.8 bits (81), Expect = 0.67 Identities = 17/41 (41%), Positives = 24/41 (58%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 EYD+V VG G +GL+ A ++ +PA + VIE G H Sbjct: 20 EYDVVTVGAGPAGLSFAIRLKQLNPALSVCVIEKSSTIGAH 60>ref|NP_681164.1| protoporphyrinogen oxidase [Thermosynechococcus elongatus BP-1] dbj|BAC07926.1| protoporphyrinogen oxidase [Thermosynechococcus elongatus BP-1] Length = 467 Score = 35.8 bits (81), Expect = 0.67 Identities = 16/41 (39%), Positives = 25/41 (60%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 E D+ +VGGG+SGL+ AW + P +++E D GG+ Sbjct: 3 EVDVAIVGGGLSGLSVAWRLQRSAPHYSGVLLEASDRLGGN 43>emb|CAC01605.1| putative halogenase [Anabaena sp. 90] Length = 625 Score = 35.8 bits (81), Expect = 0.68 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 15/122 (12%) Query: 72 EEYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQAGGRTIL--GY 129 E YD+V+ GGG++GL A + + P I V+ D G + F+ G T+ + Sbjct: 63 ETYDVVICGGGLAGLTLARQLKLQKPNMAIAVL---DKMSGLSPEASFKVGESTVEVGAF 119 Query: 130 GGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFY--PGLGLSRAVFFDKASFGV 187 + +LQ + Y E+ +HL+K LG L+ F T+F P LGLS F S+ + Sbjct: 120 YLANTLQLTD--YFEE-QHLVK-LG--LRYFFNNSATNFQERPELGLSE--FHAPNSYQI 171 Query: 188 DK 189 D+ Sbjct: 172 DR 173>ref|NP_636705.1| dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM40629.1| dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 416 Score = 35.8 bits (81), Expect = 0.69 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Query: 76 LVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQAGGR 124 + VVG GI+GL AAW R+ + + E D GGH ++ Q G+ Sbjct: 6 IAVVGSGIAGLGAAWLLSRRY---EVTLFEAADYLGGHTHTHDIQLEGQ 51>ref|NP_296504.1| protoporphyrinogen oxidase [Chlamydia muridarum] pir||D81739 protoporphyrinogen oxidase TC0121 [imported] - Chlamydia muridarum (strain Nigg) gb|AAF38999.1| protoporphyrinogen oxidase [Chlamydia muridarum] Length = 424 Score = 35.8 bits (81), Expect = 0.76 Identities = 15/36 (41%), Positives = 24/36 (66%) Query: 77 VVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 +VVG GI+GL+AAW+ +R P ++ ++E GG Sbjct: 5 LVVGSGIAGLSAAWWLHKRFPHMQLSILEKESRPGG 40>ref|NP_714380.1| L-amino acid oxidase [Leptospira interrogans serovar lai str. 56601] gb|AAN51398.1|AE011573_5 L-amino acid oxidase [Leptospira interrogans serovar lai str. 56601] Length = 447 Score = 35.8 bits (81), Expect = 0.77 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 9/93 (9%) Query: 76 LVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGHAKRNEFQAGGRTILGYGGSESL 135 ++V+GGGISGL A++ + ++ +IE D GG + +G L G+E + Sbjct: 38 VIVMGGGISGLYASYLLSK--TGIKVQLIEATDRLGGRIRTVTDVSGNFLDL---GAEWI 92 Query: 136 QSPNALYSEDAKHLLKRLGVELKRFETAFDTDF 168 Q+ + AK L++ LG++ FE D F Sbjct: 93 QAEH----RTAKSLIRELGLKTTDFEVQSDLFF 121>ref|NP_298587.1| electron transfer flavoprotein ubiquinone oxidoreductase [Xylella fastidiosa 9a5c] pir||C82698 electron transfer flavoprotein ubiquinone oxidoreductase XF1298 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF84107.1|AE003963_4 electron transfer flavoprotein ubiquinone oxidoreductase [Xylella fastidiosa 9a5c] Length = 548 Score = 35.8 bits (81), Expect = 0.79 Identities = 17/41 (41%), Positives = 23/41 (56%) Query: 73 EYDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 EYD+V VG G +GLA A ++ +P + VIE G H Sbjct: 19 EYDIVTVGAGPAGLAFAIRLKQLNPELSVCVIEKSSTIGAH 59>ref|NP_464410.1| similar to protoporphyrinogen IX and coproporphyrinogen III oxidase (HemY) [Listeria monocytogenes EGD-e] emb|CAC98962.1| similar to protoporphyrinogen IX and coproporphyrinogen III oxidase (HemY) [Listeria monocytogenes] Length = 459 Score = 35.4 bits (80), Expect = 0.80 Identities = 15/37 (40%), Positives = 25/37 (67%) Query: 76 LVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 +V++GGG+SGLAAA+ ++ HP ++E + GG Sbjct: 4 IVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGG 40>ref|NP_470224.1| similar to protoporphyrinogen IX and coproporphyrinogen III oxidase (HemY) [Listeria innocua] emb|CAC96115.1| similar to protoporphyrinogen IX and coproporphyrinogen III oxidase (HemY) [Listeria innocua] Length = 459 Score = 35.4 bits (80), Expect = 0.80 Identities = 15/37 (40%), Positives = 25/37 (67%) Query: 76 LVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGG 112 +V++GGG+SGLAAA+ ++ HP ++E + GG Sbjct: 4 IVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGG 40>gb|ZP_00094878.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 395 Score = 35.4 bits (80), Expect = 0.82 Identities = 15/40 (37%), Positives = 26/40 (65%) Query: 74 YDLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 YD+V+VGGG +GLAA+ ++ +P + ++E + G H Sbjct: 9 YDVVIVGGGPAGLAASIRLKQVNPEISVCILEKGSEIGAH 48>gb|ZP_00007697.1| hypothetical protein [Rhodobacter sphaeroides] Length = 499 Score = 35.4 bits (80), Expect = 0.82 Identities = 18/39 (46%), Positives = 21/39 (53%) Query: 75 DLVVVGGGISGLAAAWFYRERHPAARILVIENHDDFGGH 113 D V+ GGGI GLA A + HP ARI V+E H Sbjct: 108 DFVITGGGIVGLATALRLQSLHPGARISVLEKEPAVARH 146
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
Posted date: Nov 18, 2002 11:33 PM
Number of letters in database: 395,164,443
Number of sequences in database: 1,241,201
Lambda K H
0.320 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,940,042
Number of Sequences: 1241201
Number of extensions: 7303712
Number of successful extensions: 20288
Number of sequences better than 10.0: 274
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 20115
Number of HSP's gapped (non-prelim): 296
length of query: 620
length of database: 137,611,225
effective HSP length: 121
effective length of query: 499
effective length of database: 83,646,314
effective search space: 41739510686
effective search space used: 41739510686
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)