Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1034855706-01190-1430 Query= (1323 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) 1,429,325 sequences; 6,956,326,371 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports Score E Sequences producing significant alignments: (bits) Value gi|340726|gb|M22618.1|SMASHLAB Serratia marcescens (clone p... 777 0.0 gi|19572286|emb|AJ438949.1|ECO438949 Cloning vector pHK11-h... 434 e-119 gi|19572284|emb|AJ438948.1|ECO438948 Cloning vector pHK10-h... 434 e-119 gi|19572282|emb|AJ438947.1|ECO438947 Cloning vector pHK11-apra 434 e-119 gi|19572280|emb|AJ438946.1|ECO438946 Cloning vector pHK10-apra 434 e-119 gi|19572273|emb|AJ431691.1|ECO431691 Cloning vector pHK9-hygro 434 e-119 gi|19572271|emb|AJ431690.1|ECO431690 Cloning vector pHK9-apra 434 e-119 gi|1163175|gb|U32991.1|ECU32991 Escherichia coli mini-Tn5 k... 363 3e-98 gi|9836704|gb|AF164956.1| Corynebacterium glutamicum strain... 278 2e-72 gi|17157971|gb|U37105.2|XXU37105 Pseudomonas aeruginosa pla... 278 2e-72 gi|21930298|gb|AF071413.2| Assembled sequence of transposon... 278 2e-72 gi|16357504|gb|AF174129.3| Escherichia coli plasmid pMSP071... 278 2e-72 gi|21898660|gb|AY115475.1| Uncultured bacterium plasmid pSp... 278 2e-72 gi|155023|gb|M86913.1|TRNTN21CAS Shigella sonnei transposon... 278 2e-72 gi|21450881|gb|AF326777.2| Shigella flexneri 2a SRL pathoge... 278 2e-72 gi|15384482|gb|AF313471.1| Pseudomonas aeruginosa class I i... 278 2e-72 gi|15375393|gb|U12441.2|ECU12441 Escherichia coli plasmid R... 278 2e-72 gi|18958399|gb|AF355189.1| Pseudomonas aeruginosa integron ... 278 2e-72 gi|12719011|gb|AF261825.2| Salmonella enterica subsp. enter... 278 2e-72 gi|17386059|gb|AF445082.1|AF445082 Acinetobacter baumannii ... 278 2e-72 gi|17157968|gb|L06418.4|PDGINTORF Escherichia coli integron... 278 2e-72 gi|13940486|gb|AF313472.1|AF313472 Pseudomonas aeruginosa p... 278 2e-72 gi|15029570|gb|U67194.2|EAU67194 Enterobacter aerogenes pla... 278 2e-72 gi|151299|gb|M73819.1|PSEIN0PVS1 Pseudomonas aeruginosa pla... 278 2e-72 gi|13445487|gb|AF263519.1|AF263519 Pseudomonas aeruginosa i... 278 2e-72 gi|7381447|gb|AF191564.1|AF191564 Pseudomonas aeruginosa in... 278 2e-72 gi|13344937|gb|AF263520.1|AF263520 Pseudomonas aeruginosa i... 278 2e-72 gi|13272354|gb|AF302086.1|AF302086 Pseudomonas aeruginosa p... 278 2e-72 gi|10185689|gb|AF188331.1|AF188331 Shigella flexneri transp... 278 2e-72 gi|8118289|gb|AF255921.1|AF255921 Shigella flexneri recombi... 278 2e-72 gi|4539647|gb|AF034958.1|AF034958 Enterobacter aerogenes pl... 278 2e-72 gi|6752459|gb|AF156486.1|AF156486 Klebsiella pneumoniae int... 278 2e-72 gi|3764091|gb|AF078527.1|AF078527 Pseudomonas aeruginosa cl... 278 2e-72 gi|17059596|emb|AJ420072.1|CGL420072 Corynebacterium glutam... 278 2e-72 gi|1292927|gb|U49101.1|PAU49101 Pseudomonas aeruginosa plas... 278 2e-72 gi|5107034|gb|AF133699.1|AF133699 Pseudomonas aeruginosa in... 278 2e-72 gi|17383994|emb|AJ310778.1|STY310778 Salmonella typhimurium... 278 2e-72 gi|4063850|gb|AF071555.1|AF071555 Salmonella typhimurium DT... 278 2e-72 gi|44283|emb|X53635.1|MFTN610 M.fortuitum DNA for Tn610 tra... 278 2e-72 gi|8176634|emb|AJ289190.1|ABA289190 Acinetobacter baumannii... 278 2e-72 gi|13508543|emb|AJ278514.1|AXY278514 Achromobacter xylosoxi... 278 2e-72 gi|18307531|emb|AJ311891.2|SIN311891 Salmonella enterica su... 278 2e-72 gi|16505740|emb|AL513383.1|STYPPHCM1 Salmonella enterica se... 278 2e-72 gi|10185049|emb|AJ294721.1|CST294721 Corynebacterium striat... 278 2e-72 gi|1220464|gb|L36547.1|PSEMT Pseudomonas aeruginosa 2293E m... 278 2e-72 gi|5565935|emb|Z50802.3|ECIN1DHFR Escherichia coli dfrxiii ... 278 2e-72 gi|7530137|emb|AJ277027.1|KPN277027 Klebsiella pneumoniae p... 278 2e-72 gi|5420397|emb|Y18050.1|PAE18050 Pseudomonas aeruginosa int... 278 2e-72 gi|48205|emb|X12870.1|TN21AADA Transposon Tn21 (plasmid R6-... 278 2e-72 gi|596249|gb|U17586.1|ABU17586 Acinetobacter baumannii amin... 278 2e-72 gi|45480|emb|X04555.1|PDGOAADB IncC multiresistance plasmid... 278 2e-72 gi|288626|emb|X72585.1|KAR751A K.aerogenes plasmid R751 gen... 278 2e-72 gi|599573|dbj|D43625.1|PSEAADA Pseudomonas aeruginosa plasm... 278 2e-72 gi|2668482|dbj|D78374.1| Pseudomonas aeruginosa plasmid pMS... 278 2e-72 gi|4958940|dbj|AB027715.1| Corynebacterium glutamicum plasm... 278 2e-72 gi|17046107|dbj|AB061794.1| Escherichia coli plasmid pCMXR1... 278 2e-72 gi|2385350|emb|Y14748.1|CGPCG4INT Corynebacterium glutamicu... 278 2e-72 gi|155035|gb|M33633.1|TRNTNPIA Transposon Tn21 integrase (t... 276 6e-72 gi|396475|emb|X74412.1|SOAADB S.oranienburg aadB gene for 2... 270 4e-70 gi|4191249|emb|Y18556.1|CVE18556 Cloning vector pSLJ8313, T... 268 1e-69 gi|3873409|gb|U90945.1|KOU90945 Klebsiella oxytoca plasmid ... 266 6e-69 gi|10198588|gb|U12338.2|PAU12338 Pseudomonas aeruginosa pla... 262 9e-68 gi|45765|emb|X15852.1|PRAACC1 Plasmid R1033 (Tn1696) aacC1 ... 262 9e-68 gi|4210822|emb|AJ223604.1|PAE223604 Pseudomonas aeruginosa ... 262 9e-68 gi|1435171|emb|X98393.1|PACATAAC6 P.aeruginosa plasmid gene... 262 9e-68 gi|7339575|emb|AJ245670.2|SEN245670 Salmonella enterica ser... 254 2e-65 gi|14029257|gb|AF294653.1|AF294653 Pseudomonas aeruginosa I... 226 5e-57 gi|8118215|gb|AF231133.1|AF231133 Pseudomonas aeruginosa IN... 226 5e-57 gi|150959|gb|M29695.1|PSEAAC6II P.aeruginosa 6'-N-acetyltra... 224 2e-56 gi|47874|emb|X07260.1|STR46BLA S. typhimurium plasmid R46 O... 218 1e-54 gi|20086224|gb|AY079169.1| Proteus mirabilis plasmid pMAR12... 190 3e-46 gi|16151138|gb|AY049746.1| Salmonella enterica class I inte... 190 3e-46 gi|17157970|gb|L06822.3|PLPDHOS Escherichia coli plasmid pS... 190 3e-46 gi|7261127|gb|AF167990.3|AF167990 Klebsiella pneumoniae Amp... 190 3e-46 gi|4585841|emb|AJ237702.1|SEN237702 Salmonella enteritidis ... 190 3e-46 gi|40870|emb|V00252.1|EC5388 E. coli plasmid-associated dih... 190 3e-46 gi|14161935|gb|AF322577.2|AF322577 Klebsiella pneumoniae pl... 178 1e-42 gi|13925892|gb|AF315786.1| Pseudomonas aeruginosa class I i... 163 6e-38 gi|14276839|gb|AF315351.1|AF315351 Pseudomonas aeruginosa i... 163 6e-38 gi|11037459|gb|AF274336.1|AF274336 Pseudomonas syringae pv.... 149 1e-33 gi|23060461|ref|NZ_AABA01000130.1| Pseudomonas fluorescens ... 139 9e-31 gi|16422744|gb|AE008896.1| Salmonella typhimurium LT2, sect... 133 6e-29 gi|23471007|ref|NZ_AABH01000005.1| Pseudomonas syringae pv.... 107 3e-21 gi|19919175|gb|AF347074.1| Pseudomonas aeruginosa class I i... 101 2e-19 gi|18092646|gb|AF458082.1|AF458082 Citrobacter freundii iso... 100 8e-19 gi|18092639|gb|AF458081.1|AF458081 Citrobacter freundii iso... 100 8e-19 gi|22984230|ref|NZ_AAAC01000208.1| Burkholderia fungorum Bc... 100 8e-19 gi|18621131|emb|AJ430233.1|KPN430233 Klebsiella pneumoniae ... 98 3e-18 gi|23028157|ref|NZ_AAAT01000010.1| Microbulbifer degradans ... 96 1e-17 gi|1196734|gb|L06157.1|PSEAAC3IB Pseudomonas aeruginosa ami... 78 3e-12 gi|9949350|gb|AE004746.1| Pseudomonas aeruginosa PA01, sect... 62 2e-07 gi|11037461|gb|AF274338.1|AF274338 Pseudomonas syringae pv.... 62 2e-07 gi|22095173|emb|AJ493164.1|PFL493164 Pseudomonas fluorescen... 58 3e-06 gi|18490055|gb|AY069972.2| Citrobacter freundii dihydrofola... 54 4e-05 gi|23116536|ref|NZ_AABB01001099.1| Desulfitobacterium hafni... 52 2e-04 gi|9949388|gb|AE004749.1| Pseudomonas aeruginosa PA01, sect... 46 0.010 gi|15866615|gb|AF416297.1| Serratia marcescens class 3 inte... 44 0.040 gi|23105672|ref|NZ_AAAD01000091.1| Azotobacter vinelandii A... 44 0.040 gi|801873|dbj|D50438.1| Serratia marcescens DNA for integra... 44 0.040 gi|16902297|dbj|AB070224.1| Serratia marcescens tniC, intI3... 44 0.040 Alignments
RID: 1034855706-01190-1430
Query= (1323 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) 1,429,325 sequences; 6,956,326,371 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|340726|gb|M22618.1|SMASHLAB Serratia marcescens (clone p... 777 0.0 gi|19572286|emb|AJ438949.1|ECO438949 Cloning vector pHK11-h... 434 e-119 gi|19572284|emb|AJ438948.1|ECO438948 Cloning vector pHK10-h... 434 e-119 gi|19572282|emb|AJ438947.1|ECO438947 Cloning vector pHK11-apra 434 e-119 gi|19572280|emb|AJ438946.1|ECO438946 Cloning vector pHK10-apra 434 e-119 gi|19572273|emb|AJ431691.1|ECO431691 Cloning vector pHK9-hygro 434 e-119 gi|19572271|emb|AJ431690.1|ECO431690 Cloning vector pHK9-apra 434 e-119 gi|1163175|gb|U32991.1|ECU32991 Escherichia coli mini-Tn5 k... 363 3e-98 gi|9836704|gb|AF164956.1| Corynebacterium glutamicum strain... 278 2e-72 gi|17157971|gb|U37105.2|XXU37105 Pseudomonas aeruginosa pla... 278 2e-72 gi|21930298|gb|AF071413.2| Assembled sequence of transposon... 278 2e-72 gi|16357504|gb|AF174129.3| Escherichia coli plasmid pMSP071... 278 2e-72 gi|21898660|gb|AY115475.1| Uncultured bacterium plasmid pSp... 278 2e-72 gi|155023|gb|M86913.1|TRNTN21CAS Shigella sonnei transposon... 278 2e-72 gi|21450881|gb|AF326777.2| Shigella flexneri 2a SRL pathoge... 278 2e-72 gi|15384482|gb|AF313471.1| Pseudomonas aeruginosa class I i... 278 2e-72 gi|15375393|gb|U12441.2|ECU12441 Escherichia coli plasmid R... 278 2e-72 gi|18958399|gb|AF355189.1| Pseudomonas aeruginosa integron ... 278 2e-72 gi|12719011|gb|AF261825.2| Salmonella enterica subsp. enter... 278 2e-72 gi|17386059|gb|AF445082.1|AF445082 Acinetobacter baumannii ... 278 2e-72 gi|17157968|gb|L06418.4|PDGINTORF Escherichia coli integron... 278 2e-72 gi|13940486|gb|AF313472.1|AF313472 Pseudomonas aeruginosa p... 278 2e-72 gi|15029570|gb|U67194.2|EAU67194 Enterobacter aerogenes pla... 278 2e-72 gi|151299|gb|M73819.1|PSEIN0PVS1 Pseudomonas aeruginosa pla... 278 2e-72 gi|13445487|gb|AF263519.1|AF263519 Pseudomonas aeruginosa i... 278 2e-72 gi|7381447|gb|AF191564.1|AF191564 Pseudomonas aeruginosa in... 278 2e-72 gi|13344937|gb|AF263520.1|AF263520 Pseudomonas aeruginosa i... 278 2e-72 gi|13272354|gb|AF302086.1|AF302086 Pseudomonas aeruginosa p... 278 2e-72 gi|10185689|gb|AF188331.1|AF188331 Shigella flexneri transp... 278 2e-72 gi|8118289|gb|AF255921.1|AF255921 Shigella flexneri recombi... 278 2e-72 gi|4539647|gb|AF034958.1|AF034958 Enterobacter aerogenes pl... 278 2e-72 gi|6752459|gb|AF156486.1|AF156486 Klebsiella pneumoniae int... 278 2e-72 gi|3764091|gb|AF078527.1|AF078527 Pseudomonas aeruginosa cl... 278 2e-72 gi|17059596|emb|AJ420072.1|CGL420072 Corynebacterium glutam... 278 2e-72 gi|1292927|gb|U49101.1|PAU49101 Pseudomonas aeruginosa plas... 278 2e-72 gi|5107034|gb|AF133699.1|AF133699 Pseudomonas aeruginosa in... 278 2e-72 gi|17383994|emb|AJ310778.1|STY310778 Salmonella typhimurium... 278 2e-72 gi|4063850|gb|AF071555.1|AF071555 Salmonella typhimurium DT... 278 2e-72 gi|44283|emb|X53635.1|MFTN610 M.fortuitum DNA for Tn610 tra... 278 2e-72 gi|8176634|emb|AJ289190.1|ABA289190 Acinetobacter baumannii... 278 2e-72 gi|13508543|emb|AJ278514.1|AXY278514 Achromobacter xylosoxi... 278 2e-72 gi|18307531|emb|AJ311891.2|SIN311891 Salmonella enterica su... 278 2e-72 gi|16505740|emb|AL513383.1|STYPPHCM1 Salmonella enterica se... 278 2e-72 gi|10185049|emb|AJ294721.1|CST294721 Corynebacterium striat... 278 2e-72 gi|1220464|gb|L36547.1|PSEMT Pseudomonas aeruginosa 2293E m... 278 2e-72 gi|5565935|emb|Z50802.3|ECIN1DHFR Escherichia coli dfrxiii ... 278 2e-72 gi|7530137|emb|AJ277027.1|KPN277027 Klebsiella pneumoniae p... 278 2e-72 gi|5420397|emb|Y18050.1|PAE18050 Pseudomonas aeruginosa int... 278 2e-72 gi|48205|emb|X12870.1|TN21AADA Transposon Tn21 (plasmid R6-... 278 2e-72 gi|596249|gb|U17586.1|ABU17586 Acinetobacter baumannii amin... 278 2e-72 gi|45480|emb|X04555.1|PDGOAADB IncC multiresistance plasmid... 278 2e-72 gi|288626|emb|X72585.1|KAR751A K.aerogenes plasmid R751 gen... 278 2e-72 gi|599573|dbj|D43625.1|PSEAADA Pseudomonas aeruginosa plasm... 278 2e-72 gi|2668482|dbj|D78374.1| Pseudomonas aeruginosa plasmid pMS... 278 2e-72 gi|4958940|dbj|AB027715.1| Corynebacterium glutamicum plasm... 278 2e-72 gi|17046107|dbj|AB061794.1| Escherichia coli plasmid pCMXR1... 278 2e-72 gi|2385350|emb|Y14748.1|CGPCG4INT Corynebacterium glutamicu... 278 2e-72 gi|155035|gb|M33633.1|TRNTNPIA Transposon Tn21 integrase (t... 276 6e-72 gi|396475|emb|X74412.1|SOAADB S.oranienburg aadB gene for 2... 270 4e-70 gi|4191249|emb|Y18556.1|CVE18556 Cloning vector pSLJ8313, T... 268 1e-69 gi|3873409|gb|U90945.1|KOU90945 Klebsiella oxytoca plasmid ... 266 6e-69 gi|10198588|gb|U12338.2|PAU12338 Pseudomonas aeruginosa pla... 262 9e-68 gi|45765|emb|X15852.1|PRAACC1 Plasmid R1033 (Tn1696) aacC1 ... 262 9e-68 gi|4210822|emb|AJ223604.1|PAE223604 Pseudomonas aeruginosa ... 262 9e-68 gi|1435171|emb|X98393.1|PACATAAC6 P.aeruginosa plasmid gene... 262 9e-68 gi|7339575|emb|AJ245670.2|SEN245670 Salmonella enterica ser... 254 2e-65 gi|14029257|gb|AF294653.1|AF294653 Pseudomonas aeruginosa I... 226 5e-57 gi|8118215|gb|AF231133.1|AF231133 Pseudomonas aeruginosa IN... 226 5e-57 gi|150959|gb|M29695.1|PSEAAC6II P.aeruginosa 6'-N-acetyltra... 224 2e-56 gi|47874|emb|X07260.1|STR46BLA S. typhimurium plasmid R46 O... 218 1e-54 gi|20086224|gb|AY079169.1| Proteus mirabilis plasmid pMAR12... 190 3e-46 gi|16151138|gb|AY049746.1| Salmonella enterica class I inte... 190 3e-46 gi|17157970|gb|L06822.3|PLPDHOS Escherichia coli plasmid pS... 190 3e-46 gi|7261127|gb|AF167990.3|AF167990 Klebsiella pneumoniae Amp... 190 3e-46 gi|4585841|emb|AJ237702.1|SEN237702 Salmonella enteritidis ... 190 3e-46 gi|40870|emb|V00252.1|EC5388 E. coli plasmid-associated dih... 190 3e-46 gi|14161935|gb|AF322577.2|AF322577 Klebsiella pneumoniae pl... 178 1e-42 gi|13925892|gb|AF315786.1| Pseudomonas aeruginosa class I i... 163 6e-38 gi|14276839|gb|AF315351.1|AF315351 Pseudomonas aeruginosa i... 163 6e-38 gi|11037459|gb|AF274336.1|AF274336 Pseudomonas syringae pv.... 149 1e-33 gi|23060461|ref|NZ_AABA01000130.1| Pseudomonas fluorescens ... 139 9e-31 gi|16422744|gb|AE008896.1| Salmonella typhimurium LT2, sect... 133 6e-29 gi|23471007|ref|NZ_AABH01000005.1| Pseudomonas syringae pv.... 107 3e-21 gi|19919175|gb|AF347074.1| Pseudomonas aeruginosa class I i... 101 2e-19 gi|18092646|gb|AF458082.1|AF458082 Citrobacter freundii iso... 100 8e-19 gi|18092639|gb|AF458081.1|AF458081 Citrobacter freundii iso... 100 8e-19 gi|22984230|ref|NZ_AAAC01000208.1| Burkholderia fungorum Bc... 100 8e-19 gi|18621131|emb|AJ430233.1|KPN430233 Klebsiella pneumoniae ... 98 3e-18 gi|23028157|ref|NZ_AAAT01000010.1| Microbulbifer degradans ... 96 1e-17 gi|1196734|gb|L06157.1|PSEAAC3IB Pseudomonas aeruginosa ami... 78 3e-12 gi|9949350|gb|AE004746.1| Pseudomonas aeruginosa PA01, sect... 62 2e-07 gi|11037461|gb|AF274338.1|AF274338 Pseudomonas syringae pv.... 62 2e-07 gi|22095173|emb|AJ493164.1|PFL493164 Pseudomonas fluorescen... 58 3e-06 gi|18490055|gb|AY069972.2| Citrobacter freundii dihydrofola... 54 4e-05 gi|23116536|ref|NZ_AABB01001099.1| Desulfitobacterium hafni... 52 2e-04 gi|9949388|gb|AE004749.1| Pseudomonas aeruginosa PA01, sect... 46 0.010 gi|15866615|gb|AF416297.1| Serratia marcescens class 3 inte... 44 0.040 gi|23105672|ref|NZ_AAAD01000091.1| Azotobacter vinelandii A... 44 0.040 gi|801873|dbj|D50438.1| Serratia marcescens DNA for integra... 44 0.040 gi|16902297|dbj|AB070224.1| Serratia marcescens tniC, intI3... 44 0.040
>gi|340726|gb|M22618.1|SMASHLAB Serratia marcescens (clone pES2) hemolysin (hlsB), and hemolysin determinant (hlsB) genes, complete cds Length = 7253 Score = 777 bits (392), Expect = 0.0 Identities = 533/575 (92%), Gaps = 6/575 (1%) Strand = Plus / Plus Query: 213 gatcctgcacaacggcatcggcctgctgagcggctactggggcggcaaactgttcggctt 272 ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 2 gatcctgcacaacggcatcggtctgctgagcggctattggggcggcaagttgttcggctt 61 Query: 273 cgacgagtccacctgccgcacgctggcgatcgaagtcgggatgcagaactccgggctggc 332 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 62 cgacgagtccacctgccgcacgctggcgatcgaagtcggcatgcagaactccgggttggc 121 Query: 333 agccacgttgggcaaaatctatttctcgccgctggccgcgctg-cgggcgcgctgttctc 391 |||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 122 ggccacgctgggtaaaatctacttctcgccgctggccgcgctgccgggcgcgctgttctc 181 Query: 392 ggtctggcacaacctctncgg-tcgctgctgcaggggatttgggtccngccgccctatca 450 ||||| ||||||||||| ||| ||||||||| ||| | | ||||| |||||||||||| Sbjct: 182 ggtct-gcacaacctctccggttcgctgctg-gcgggttattggtccggccgccctatca 239 Query: 451 ag-aaaaataaaccgcctgtcgggacgcaaacaattgcgtcccgtttcttccctgcgaaa 509 || |||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||| Sbjct: 240 agaaaaaataaaccgcctgcagggacg-aaacaattgcgtcccttttcttctctgcgaaa 298 Query: 510 tttcgtatttcccactggtcggattgtcataatttccctcatcccctatcatccgtgaaa 569 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 299 tttcgtatttcccactggtcggattgtcataatttcccccataccctatcatccgtgaaa 358 Query: 570 aataaaaattcagattcttcctatccatgccgataatgttggcaagaggaagagacgttc 629 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 359 aataaaaactcagattcttcctatccatgccgataatgttggcaagaggaagagacgctc 418 Query: 630 tacnnnnnnnaattaattaagtcaccagggttgcccgccataaaagaagcagcctaatta 689 || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 cactttttttaattaattaagtcaccagggttgcccgccataaaagaagcagcctaatta 478 Query: 690 ttatttagatatatacccaccgtcttatttgctgcggcaaatcaagatacctcgcaatgt 749 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 479 ttatttagatatatacccaccgtcttatttgctgtggcaaatcaagatatctcgcaatgt 538 Query: 750 gcatgtcgctcattatttcgggccggccctcggcc 784 |||||||||||||||||||||||||||| |||||| Sbjct: 539 gcatgtcgctcattatttcgggccggccgtcggcc 573
>gi|19572286|emb|AJ438949.1|ECO438949 Cloning vector pHK11-hygro Length = 2887 Score = 434 bits (219), Expect = e-119 Identities = 219/219 (100%) Strand = Plus / Minus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2636 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 2577 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2576 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 2517 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2516 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 2457 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2456 cagatccttgacccgcagttgcaaaccctcactgatccg 2418
Score = 149 bits (75), Expect = 1e-33 Identities = 75/75 (100%) Strand = Plus / Plus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 519 Query: 978 tcatccaccggatca 992 ||||||||||||||| Sbjct: 520 tcatccaccggatca 534
Score = 95.6 bits (48), Expect = 1e-17 Identities = 48/48 (100%) Strand = Plus / Minus Query: 848 gatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 895 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2706 gatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 2659
Score = 95.6 bits (48), Expect = 1e-17 Identities = 48/48 (100%) Strand = Plus / Plus Query: 848 gatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 895 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 437
>gi|19572284|emb|AJ438948.1|ECO438948 Cloning vector pHK10-hygro Length = 2887 Score = 434 bits (219), Expect = e-119 Identities = 219/219 (100%) Strand = Plus / Minus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2636 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 2577 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2576 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 2517 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2516 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 2457 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2456 cagatccttgacccgcagttgcaaaccctcactgatccg 2418
>gi|19572282|emb|AJ438947.1|ECO438947 Cloning vector pHK11-apra Length = 2337 Score = 434 bits (219), Expect = e-119 Identities = 219/219 (100%) Strand = Plus / Plus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 519 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 579 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 639 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 ||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cagatccttgacccgcagttgcaaaccctcactgatccg 678
Score = 149 bits (75), Expect = 1e-33 Identities = 75/75 (100%) Strand = Plus / Minus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2086 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 2027 Query: 978 tcatccaccggatca 992 ||||||||||||||| Sbjct: 2026 tcatccaccggatca 2012
Score = 95.6 bits (48), Expect = 1e-17 Identities = 48/48 (100%) Strand = Plus / Minus Query: 848 gatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 895 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2156 gatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 2109
>gi|19572280|emb|AJ438946.1|ECO438946 Cloning vector pHK10-apra Length = 2337 Score = 434 bits (219), Expect = e-119 Identities = 219/219 (100%) Strand = Plus / Plus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 519 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 579 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 639 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 ||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cagatccttgacccgcagttgcaaaccctcactgatccg 678
>gi|19572273|emb|AJ431691.1|ECO431691 Cloning vector pHK9-hygro Length = 2887 Score = 434 bits (219), Expect = e-119 Identities = 219/219 (100%) Strand = Plus / Minus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2636 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 2577 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2576 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 2517 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2516 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 2457 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2456 cagatccttgacccgcagttgcaaaccctcactgatccg 2418
>gi|19572271|emb|AJ431690.1|ECO431690 Cloning vector pHK9-apra Length = 2337 Score = 434 bits (219), Expect = e-119 Identities = 219/219 (100%) Strand = Plus / Plus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 519 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 579 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 639 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 ||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cagatccttgacccgcagttgcaaaccctcactgatccg 678
>gi|1163175|gb|U32991.1|ECU32991 Escherichia coli mini-Tn5 kanamycin transposon Length = 2356 Score = 363 bits (183), Expect = 3e-98 Identities = 212/219 (96%), Gaps = 2/219 (0%) Strand = Plus / Minus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2222 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 2163 Query: 978 tcatccaccggatcaattcccctgctcgcgcaggctgggtgccaagctctcgggtaacat 1037 ||||||||||||||||||||||||||| | ||| |||||| |||||||||| |||||||| Sbjct: 2162 tcatccaccggatcaattcccctgctcacacagactgggtaccaagctctc-ggtaacat 2104 Query: 1038 caaggcccgatccttggagcccttgccctcccgcacgatgatcgtgccgtgatcgaaatc 1097 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2103 caaggcccgatccttggagcccttgccctcccg-acgatgatcgtgccgtgatcgaaatc 2045 Query: 1098 cagatccttgacccgcagttgcaaaccctcactgatccg 1136 |||||||||||||| |||||||||||||||||||||||| Sbjct: 2044 cagatccttgacccacagttgcaaaccctcactgatccg 2006
Score = 198 bits (100), Expect = 1e-48 Identities = 109/112 (97%) Strand = Plus / Minus Query: 784 ctgactcttatacacaagtgcggccgcggcctaggcggccgaagcttgtcgacgaattcc 843 ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 2356 ctgactcttatacacaagttcggccacggcctaggcggccgcagcttgtcgacgaattcc 2297 Query: 844 cggggatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 895 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2296 cggggatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 2245
Score = 149 bits (75), Expect = 1e-33 Identities = 75/75 (100%) Strand = Plus / Plus Query: 918 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 ggggacctctagggtccccaattaattagtaatataatctattaaaggtcattcaaaagg 173 Query: 978 tcatccaccggatca 992 ||||||||||||||| Sbjct: 174 tcatccaccggatca 188
Score = 119 bits (60), Expect = 9e-25 Identities = 60/60 (100%) Strand = Plus / Plus Query: 836 cgaattcccggggatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 cgaattcccggggatccggtgattgattgagcaagctttatgcttgtaaaccgttttgtg 91
>gi|9836704|gb|AF164956.1| Corynebacterium glutamicum strain ATCC31830 R-plasmid pCG4, complete sequence Length = 29371 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14262 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 14321 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14322 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 14381 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 14382 caaaccctcactgatccgca 14401
>gi|17157971|gb|U37105.2|XXU37105 Pseudomonas aeruginosa plasmid R388-R151 hybrid transposon Tn1404 class 1 integron, partial sequence Length = 5268 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|21930298|gb|AF071413.2| Assembled sequence of transposon Tn21 containing transposition genes, the integron In2, and the mercury resistance operon Length = 19672 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4683 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 4742 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4743 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 4802 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 4803 caaaccctcactgatccgca 4822
>gi|16357504|gb|AF174129.3| Escherichia coli plasmid pMSP071 class I sulI-type integron In60, partial sequence Length = 13029 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 680 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 740 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 741 caaaccctcactgatccgca 760
Score = 190 bits (96), Expect = 3e-46 Identities = 96/96 (100%) Strand = Plus / Plus Query: 1227 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 1286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5749 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 5808 Query: 1287 gaagtctgcgaacactgcggcggtcacgtcaaagtg 1322 |||||||||||||||||||||||||||||||||||| Sbjct: 5809 gaagtctgcgaacactgcggcggtcacgtcaaagtg 5844
>gi|21898660|gb|AY115475.1| Uncultured bacterium plasmid pSp1 class 1 integron integrase (intI1), beta-lactamase (oxa10), aminoglycoside-3'-(9)-O-adenylyltransferase (aadA1), chloramphenicol resistance protein (cmlA5), quaternary ammonium compound resistance protein (qacEdelta1),> Length = 6329 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|155023|gb|M86913.1|TRNTN21CAS Shigella sonnei transposon Tn2426 integrase (tnpI), 2'-O-adenyltransferase (aadB), 3'-(9)-O-adenyltransferase (aadA), and 6'-N-acetyltransferase (aacA) genes, complete cds Length = 3505 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|21450881|gb|AF326777.2| Shigella flexneri 2a SRL pathogenicity island, complete sequence Length = 66714 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Minus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18687 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 18628 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18627 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 18568 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 18567 caaaccctcactgatccgca 18548
>gi|15384482|gb|AF313471.1| Pseudomonas aeruginosa class I integron Tn2521-In33 and insertion sequence IS6100 sequence Length = 6967 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 703 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 763 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 764 caaaccctcactgatccgca 783
>gi|15375393|gb|U12441.2|ECU12441 Escherichia coli plasmid R388 class 1 integron In3, complete sequence Length = 6431 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2278 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 2337 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2338 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 2397 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 2398 caaaccctcactgatccgca 2417
>gi|18958399|gb|AF355189.1| Pseudomonas aeruginosa integron In60 integrase IntI1 (intI1), aminoglycoside 3-N-acetyltransferase/aminoglycoside 6'-N-acetyltransferase fusion protein (aac(3)-Ib/aac(6')-Ib), and beta-lactamase GES-1 (blages-1) genes, complete cds Length = 3525 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 773 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 833 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 834 caaaccctcactgatccgca 853
>gi|12719011|gb|AF261825.2| Salmonella enterica subsp. enterica serovar Typhimurium genomic island I, complete sequence Length = 47723 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27280 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 27339 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27340 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 27399 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 27400 caaaccctcactgatccgca 27419
>gi|17386059|gb|AF445082.1|AF445082 Acinetobacter baumannii integron class I integrase (intI), carbapenem-hydrolyzing beta-lactamase (blaIMP-4), quaternary ammonium compound resistance protein (qacG), aminoglycoside 6'-N-acetyltransferase (aacA4), and chloramphenicol acetyltransferase va> Length = 4171 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 694 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 754 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 755 caaaccctcactgatccgca 774
>gi|17157968|gb|L06418.4|PDGINTORF Escherichia coli integron In7 plasmid pDGO100, partial sequence Length = 7634 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
Score = 190 bits (96), Expect = 3e-46 Identities = 96/96 (100%) Strand = Plus / Plus Query: 1227 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 1286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4852 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 4911 Query: 1287 gaagtctgcgaacactgcggcggtcacgtcaaagtg 1322 |||||||||||||||||||||||||||||||||||| Sbjct: 4912 gaagtctgcgaacactgcggcggtcacgtcaaagtg 4947
>gi|13940486|gb|AF313472.1|AF313472 Pseudomonas aeruginosa plasmid RPL11 transposon Tn1403, partial sequence; class 1 integron In28, complete sequence; insertion sequence IS6100, complete sequence; and transposon Tn1403, partial sequence Length = 6699 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 788 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 848 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 849 caaaccctcactgatccgca 868
>gi|15029570|gb|U67194.2|EAU67194 Enterobacter aerogenes plasmid R751, complete sequence Length = 53425 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32355 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 32414 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32415 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 32474 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 32475 caaaccctcactgatccgca 32494
>gi|151299|gb|M73819.1|PSEIN0PVS1 Pseudomonas aeruginosa plasmid pVS1 integron In0 integrase (int) gene, putative ethidium bromide-resistance protein gene, and dihydropteroate synthase (sul1) gene, complete cds; and unknown gene, partial cds Length = 2935 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|13445487|gb|AF263519.1|AF263519 Pseudomonas aeruginosa integron In59, partial sequence Length = 5061 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 636 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 696 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 697 caaaccctcactgatccgca 716
>gi|7381447|gb|AF191564.1|AF191564 Pseudomonas aeruginosa integron In56 integrase (intI1), metallo beta-lactamase, quaternary ammonium compound-resistance protein, and dihydropteroate synthetase type 1 (sul1) genes, complete cds; and unknown gene Length = 3843 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 636 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 696 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 697 caaaccctcactgatccgca 716
>gi|13344937|gb|AF263520.1|AF263520 Pseudomonas aeruginosa integron In58, partial sequence Length = 5648 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 636 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 696 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 697 caaaccctcactgatccgca 716
>gi|13272354|gb|AF302086.1|AF302086 Pseudomonas aeruginosa plasmid pVRP193 integron In72 DNA integrase IntI (intI), 6'-Ib' aminoglycoside acetyltransferase (aacA4), and metallo-beta-lactamase (blaVIM-2) genes, complete cds Length = 3481 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1140 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1200 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 1201 caaaccctcactgatccgca 1220
>gi|10185689|gb|AF188331.1|AF188331 Shigella flexneri transposon TnSF1 putative transposase (tnpA), putative resolvase (tnpR), putative integrase (intI), dihydropteroate synthase (sulI), macrolide 2'-phosphotransferase (mphA), aminoglycoside 3'-phosphotransferase (aphI), and beta-lactama> Length = 26652 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4683 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 4742 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4743 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 4802 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 4803 caaaccctcactgatccgca 4822
>gi|8118289|gb|AF255921.1|AF255921 Shigella flexneri recombinase and beta-lactamase genes, complete cds Length = 2428 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|4539647|gb|AF034958.1|AF034958 Enterobacter aerogenes plasmid pIP833 integron In40 6'-N-aminoglycoside acetyltransferase (aac(6')-Ib), quarternary ammonium determinant (qacF), chloramphenicol resistance determinant (cmlB), oxacillinase (oxa9), and sulfonamides resistance determinant> Length = 6588 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|6752459|gb|AF156486.1|AF156486 Klebsiella pneumoniae integron integrase INTI1 (intI1), beta-lactamase GES-1 (ges-1), aminoglycoside 6'-N-acetyltransferase type II AAC6'Ib (aac(6')-Ib'), dihydrofolate reductase DHFRXVb (dhfrXVb), chloramphenicol transporter CMLA4 (cmlA4), and strepto> Length = 5863 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 636 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 696 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 697 caaaccctcactgatccgca 716
>gi|3764091|gb|AF078527.1|AF078527 Pseudomonas aeruginosa class I integrase (intI), transposase, beta-lactamase CEF-1 precursor (blaCEF-1), aadB transferase (aadB), and ribosylating transferase ARR-2 (arr-2) genes, complete cds; and chloramphenicol transporter (cmlA) gene, partial cds Length = 5598 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 703 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 763 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 764 caaaccctcactgatccgca 783
>gi|17059596|emb|AJ420072.1|CGL420072 Corynebacterium glutamicum plasmid pTET3 Length = 27856 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26055 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 26114 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26115 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 26174 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 26175 caaaccctcactgatccgca 26194
>gi|1292927|gb|U49101.1|PAU49101 Pseudomonas aeruginosa plasmid pVS1 integron In0 5'-conserved segment, DNA integrase (intI1), ethidium bromide resistance (qacEdelta1), dihydropteroate synthase (sul1), orf5, istB, istA, tniBdelta1 and tniA genes, complete cds Length = 8629 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 733 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 793 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 794 caaaccctcactgatccgca 813
>gi|5107034|gb|AF133699.1|AF133699 Pseudomonas aeruginosa integron In50 integrase (int1), IS2000 transposase (IS2000 tnpA), extended spectrum beta-lactamase (blaVEB-1), amonoglycoside adenylyltransferase (aadB), quaternary ammonium compound-resistance protein (qacEdelta1), and dihydropt> Length = 6640 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 503 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 563 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 564 caaaccctcactgatccgca 583
>gi|17383994|emb|AJ310778.1|STY310778 Salmonella typhimurium IncF1 plasmid, In-t1 and In-t2 integrons Length = 12085 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1054 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1114 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 1115 caaaccctcactgatccgca 1134
Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8617 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 8676 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8677 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 8736 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 8737 caaaccctcactgatccgca 8756
Score = 190 bits (96), Expect = 3e-46 Identities = 96/96 (100%) Strand = Plus / Plus Query: 1227 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 1286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5979 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 6038 Query: 1287 gaagtctgcgaacactgcggcggtcacgtcaaagtg 1322 |||||||||||||||||||||||||||||||||||| Sbjct: 6039 gaagtctgcgaacactgcggcggtcacgtcaaagtg 6074
>gi|4063850|gb|AF071555.1|AF071555 Salmonella typhimurium DT104 antibiotic resistance gene cluster, complete sequence Length = 13077 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1302 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1362 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 1363 caaaccctcactgatccgca 1382
>gi|44283|emb|X53635.1|MFTN610 M.fortuitum DNA for Tn610 transposable element Length = 4262 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1438 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1439 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1498 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 1499 caaaccctcactgatccgca 1518
>gi|8176634|emb|AJ289190.1|ABA289190 Acinetobacter baumannii class 1 integron (intI1 gene for class 1 integrase and aadB gene for aminoglycoside (2') adenylyltransferase Length = 3858 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|13508543|emb|AJ278514.1|AXY278514 Achromobacter xylosoxidans subsp. denitrificans plasmid pAX22, DNA for integron In70 Length = 4770 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 816 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 876 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 877 caaaccctcactgatccgca 896
>gi|18307531|emb|AJ311891.2|SIN311891 Salmonella enterica subsp. enterica serovar Infantis plasmid pS21 class I sulI-type integron (InS21) Length = 8861 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 446 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 506 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 507 caaaccctcactgatccgca 526
Score = 190 bits (96), Expect = 3e-46 Identities = 96/96 (100%) Strand = Plus / Plus Query: 1227 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 1286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5894 gagcgccaccgcgccatgacctggatgcaacgcctcaagcgagtcttcaatattgatatt 5953 Query: 1287 gaagtctgcgaacactgcggcggtcacgtcaaagtg 1322 |||||||||||||||||||||||||||||||||||| Sbjct: 5954 gaagtctgcgaacactgcggcggtcacgtcaaagtg 5989
>gi|16505740|emb|AL513383.1|STYPPHCM1 Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18 plasmid pHCM1 Length = 218160 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Minus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121618 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 121559 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121558 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 121499 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 121498 caaaccctcactgatccgca 121479
>gi|10185049|emb|AJ294721.1|CST294721 Corynebacterium striatum sul3 gene for dihydropteroate synthetase Length = 2032 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 244 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 304 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 305 caaaccctcactgatccgca 324
>gi|1220464|gb|L36547.1|PSEMT Pseudomonas aeruginosa 2293E multiresistance b-lactamase transposon Tn1412 Length = 24489 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 2163 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2164 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 2223 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 2224 caaaccctcactgatccgca 2243
>gi|5565935|emb|Z50802.3|ECIN1DHFR Escherichia coli dfrxiii and aadA4 genes for dihydrofolate reductase and adenyltransferase Length = 3099 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 60 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 120 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 121 caaaccctcactgatccgca 140
>gi|7530137|emb|AJ277027.1|KPN277027 Klebsiella pneumoniae partial tnpA gene, arr-3 gene and partial intI gene gene Length = 2022 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 385 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 445 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 446 caaaccctcactgatccgca 465
>gi|5420397|emb|Y18050.1|PAE18050 Pseudomonas aeruginosa intI1, blaVIM and aacA4 (partial) genes Length = 2310 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 572 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 632 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 633 caaaccctcactgatccgca 652
>gi|48205|emb|X12870.1|TN21AADA Transposon Tn21 (plasmid R6-5) aadA-sulI region for spectinomycin and sulfonamide resistance Length = 3794 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 637 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 697 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 698 caaaccctcactgatccgca 717
>gi|596249|gb|U17586.1|ABU17586 Acinetobacter baumannii aminoglycoside modifying enzyme (ant2) and integrase (tnp1) genes, complete cds Length = 1772 Score = 278 bits (140), Expect = 2e-72 Identities = 140/140 (100%) Strand = Plus / Plus Query: 999 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 1058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ctgctcgcgcaggctgggtgccaagctctcgggtaacatcaaggcccgatccttggagcc 503 Query: 1059 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 1118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 cttgccctcccgcacgatgatcgtgccgtgatcgaaatccagatccttgacccgcagttg 563 Query: 1119 caaaccctcactgatccgca 1138 |||||||||||||||||||| Sbjct: 564 caaaccctcactgatccgca 583
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) Posted date: Oct 17, 2002 12:07 AM Number of letters in database: -145,227 Number of sequences in database: 969,095 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 524,607 Number of Sequences: 1429325 Number of extensions: 524607 Number of successful extensions: 4949 Number of sequences better than 10.0: 328 length of query: 1323 length of database: 589,707,643 effective HSP length: 20 effective length of query: 1303 effective length of database: 586,371,143 effective search space: 764041599329 effective search space used: 764041599329 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
