Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.RID: 1013184769-27663-2026
Query= 8C7_131_132_TBLASTX (839 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) 1,170,126 sequences; 4,850,248,762 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQsScore E Sequences producing significant alignments: (bits) Value N gi|9937210|gb|AF210249.1|AF210249 Streptomyces verticil... 35 8e-04 3 gi|516858|emb|X74670.1|AEHOXXAE A.eutrophus hoxX, hoxA ... 40 0.002 2 gi|9950011|gb|AE004801.1|AE004801 Pseudomonas aeruginos... 35 0.005 2 gi|9946572|gb|AE004505.1|AE004505 Pseudomonas aeruginos... 43 0.005 1 gi|15823997|dbj|AB070942.1|AB070942 Streptomyces avermi... 35 0.007 3 gi|5123647|emb|AL079345.1|SCE68 Streptomyces coelicolor... 35 0.007 3 gi|5139638|emb|X81885.2|SFTYLORF Streptomyces fradiae t... 29 0.008 3 gi|7981385|emb|AL353815.2|SCD6 Streptomyces coelicolor ... 35 0.009 2 gi|13568429|dbj|D45382.2|STMAFSK1 Streptomyces coelicol... 35 0.010 2 gi|14021442|dbj|AP002995.2|AP002995 Mesorhizobium loti ... 37 0.010 2 gi|15419653|gb|AF295255.1|AF295255 Ralstonia solanacear... 42 0.013 1 gi|8050835|gb|AF263912.1|AF263912 Streptomyces noursei ... 40 0.013 2 gi|9947468|gb|AE004580.1|AE004580 Pseudomonas aeruginos... 41 0.018 1 gi|15419647|gb|AF295252.1|AF295252 Ralstonia solanacear... 41 0.018 1 gi|17430467|emb|AL646076.1|AL646076 Ralstonia solanacea... 40 0.020 2 gi|14023393|dbj|AP003001.2|AP003001 Mesorhizobium loti ... 38 0.023 3 gi|3294233|emb|AL031031.1|SC7C7 Streptomyces coelicolor... 35 0.024 2 gi|39239|emb|X63650.1|AVDHODNA A.vinelandii ORF3, ORF4,... 37 0.025 2 gi|15155431|gb|AE007986.1|AE007986 Agrobacterium tumefa... 28 0.030 4 gi|13423996|gb|AE005914.1|AE005914 Caulobacter crescent... 31 0.031 3 gi|9950116|gb|AE004811.1|AE004811 Pseudomonas aeruginos... 34 0.032 3 gi|17738849|gb|AE009020.1|AE009020 Agrobacterium tumefa... 28 0.034 4 gi|11323213|emb|AL450350.1|SC10F4 Streptomyces coelicol... 35 0.037 3 gi|15419667|gb|AF295262.1|AF295262 Ralstonia solanacear... 39 0.037 2 gi|9951206|gb|AE004906.1|AE004906 Pseudomonas aeruginos... 29 0.037 4 gi|3169026|emb|AL023702.1|SC1C3 Streptomyces coelicolor... 37 0.038 3 gi|15823967|dbj|AB070940.1|AB070940 Streptomyces avermi... 35 0.038 2 gi|12274798|emb|AL512902.1|SC2C4 Streptomyces coelicolo... 29 0.043 4 gi|3769510|gb|AF076477.1|AF076477 Burkholderia cepacia ... 31 0.048 3 gi|151207|gb|M84922.1|PSEEGL Pseudomonas solanacearum b... 39 0.048 2 gi|2853593|gb|AF031898.1|AF031898 Pseudomonas putida ch... 33 0.051 3 gi|397996|gb|L23970.1|AVIHOXHYP Azotobacter vinelandii ... 37 0.052 2 gi|13162063|emb|AL589164.1|SC2K8 Streptomyces coelicolo... 34 0.055 2 gi|5738760|emb|AL109950.1|SCJ4 Streptomyces coelicolor ... 33 0.059 3 gi|9622529|gb|AF173961.1|AF173961 Thauera aromatica bbs... 29 0.063 3 gi|15073158|emb|AL591783.1|SME591783 Sinorhizobium meli... 40 0.065 1 gi|15419649|gb|AF295253.1|AF295253 Ralstonia solanacear... 40 0.065 1 gi|15419645|gb|AF295251.1|AF295251 Ralstonia solanacear... 40 0.065 1 gi|15419643|gb|AF295250.1|AF295250 Ralstonia solanacear... 40 0.065 1 gi|8546869|emb|AL359214.1|SC7E4 Streptomyces coelicolor... 29 0.069 4 gi|5019320|emb|AL078610.1|SCH35 Streptomyces coelicolor... 33 0.071 3 gi|9967627|emb|AL391751.1|SC9E12 Streptomyces coelicolo... 28 0.072 3 gi|9947316|gb|AE004567.1|AE004567 Pseudomonas aeruginos... 30 0.073 3 gi|13422648|gb|AE005806.1|AE005806 Caulobacter crescent... 30 0.073 3 gi|3334781|emb|AL031107.1|SC5A7 Streptomyces coelicolor... 29 0.073 2 gi|12224900|emb|AL163672.2|SCE50 Streptomyces coelicolo... 36 0.075 2 gi|1613791|gb|U57682.1|RCU57682 Rhodobacter capsulatus ... 39 0.079 2 gi|9950327|gb|AE004829.1|AE004829 Pseudomonas aeruginos... 33 0.079 2 gi|8894809|emb|AL360055.1|SCG20A Streptomyces coelicolo... 33 0.080 3 gi|758287|emb|X85969.1|SCSECAPT S.coelicolor secD, secF... 38 0.080 2Alignments >gi|9937210|gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 35.4 bits (71), Expect = 1.1 Identities = 17/46 (36%), Positives = 23/46 (49%) Frame = -1 / -3 Query: 650 STSLSPWRKKPPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPA 513 ST++ WR P C R SR R + TP +R LPA+ P+ Sbjct: 703 STTVERWRWSPRRRCCRGSRDRRAYGSWWGVRTPSRRERLPASTPS 566Score = 35.0 bits (70), Expect(3) = 8e-04 Identities = 13/31 (41%), Positives = 19/31 (60%) Frame = -3 / +1 Query: 189 PHSNAAARPVWQRHSCSA*NSTNAWGLSSSP 97 P +++A RP+W+R+S S S N W SP Sbjct: 67483 PSNSSAWRPLWRRNSASTPTSRNCWPSRRSP 67575Score = 33.6 bits (67), Expect(3) = 8e-04 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 / +3 Query: 629 RKKPPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPVP 504 R +P R R R PP P R L+PAA PA P Sbjct: 52338 RPRPADAADALPRGRARVPLRVDPPPPRPRRLVPAARPARRP 52463Score = 33.1 bits (66), Expect(2) = 3.2 Identities = 23/88 (26%), Positives = 31/88 (35%) Frame = -1 / +1 Query: 725 PPDGGFFTLKASGPAQAGKGR*KMRSTSLSPWRKKPPSGCQRRSRARLRFSQPTAPPTPM 546 PP G + ++ P+ G RS SP P R PTAP +P Sbjct: 56317 PPATGSASNPSTTPSATGGSTSPRRSGPCSPAAPPPAGTPPPSPRTCSSACPPTAPSSPA 56496 Query: 545 QRFLLPAANPAPVPIMACSKRGAAASRR 462 PAA +P P S ++ R Sbjct: 56497 SGSSRPAATSSPTPTAPASPPTGTSTTR 56580Score = 29.5 bits (58), Expect(2) = 1.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 / +2 Query: 653 RSTSLSPWRKKPPSGCQRRSRARLRFSQPTAPPTP 549 RST+ SP R + P G R +RAR P + P Sbjct: 25841 RSTNSSPSRPRAPPGRSRSARARTPSRTPNSTSGP 25945Score = 28.1 bits (55), Expect(3) = 8e-04 Identities = 15/36 (41%), Positives = 18/36 (49%) Frame = -3 / +1 Query: 339 SATTACISPC*ARQNGGHKAPPHPSTSPR*AKDTLP 232 S+TT C SP ++ G A PST PR A P Sbjct: 53686 SSTTTC*SPPTPSRHAGPPACAPPSTPPRPASTPRP 53793Score = 26.7 bits (52), Expect(2) = 3.2 Identities = 15/52 (28%), Positives = 20/52 (37%) Frame = -3 / +1 Query: 342 PSATTACISPC*ARQNGGHKAPPHPSTSPR*AKDTLPYRFAAYRRNAVQIRP 187 P T P R+ H+ H T+PR + T R A RR + P Sbjct: 69355 PVRRTRPAEPLLLRRRPAHRTRRHGGTAPRLRRRTGGARLAGRRRPPRRQPP 69510Score = 22.6 bits (43), Expect(2) = 1.3 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -3 / +2 Query: 828 TTMISTRIKRGSPPPALNSFATA 760 T +STR +PPPA +F+ A Sbjct: 25661 TRAVSTRRFPRTPPPASPAFSKA 25729>gi|516858|emb|X74670.1|AEHOXXAE A.eutrophus hoxX, hoxA and hypE genes Length = 1898 Score = 40.0 bits (81), Expect(2) = 0.002 Identities = 20/52 (38%), Positives = 21/52 (39%) Frame = -1 / -3 Query: 617 PSGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPVPIMACSKRGAAASRR 462 P C SR LR P PP P R LP AP P +G A RR Sbjct: 1401 PCSCSADSRVHLRAPIPDRPPAPRTRRPLPHCRAAPTPSCDRKTQGFPARRR 1246Score = 22.1 bits (42), Expect(2) = 0.002 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = -3 / -3 Query: 747 GDSRQQKTARRRFFYSKSIRTGSGGERPIKNAQ 649 G SRQ +ARRR + +S ++ S + N + Sbjct: 1578 GQSRQGTSARRRPSWHRSAQSRSPAGPTLANGR 1480>gi|9950011|gb|AE004801.1|AE004801 Pseudomonas aeruginosa PA01, section 362 of 529 of the complete genome Length = 10450 Score = 35.4 bits (71), Expect(2) = 0.005 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 / -3 Query: 530 PAANPAPVPIMACSKRGAAASRRENMPIKHPCGARSXRXS 411 P A+ P + C +RG +ASRR P ++ G R R + Sbjct: 4523 PPASAVPAGALRCCRRGRSASRRPGRPPRYAPGLRRSRTA 4404Score = 31.8 bits (63), Expect(2) = 0.005 Identities = 17/41 (41%), Positives = 21/41 (50%) Frame = -1 / -2 Query: 629 RKKPPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPV 507 R++P R SR RL S T PP + L PA +P PV Sbjct: 8619 RRQPSCIFNRFSRVRLSPSNCTRPPVGVWDRLRPARSPPPV 8497>gi|9946572|gb|AE004505.1|AE004505 Pseudomonas aeruginosa PA01, section 66 of 529 of the complete genome Length = 11421 Score = 43.2 bits (88), Expect = 0.005 Identities = 27/84 (32%), Positives = 36/84 (42%) Frame = -1 / +3 Query: 701 LKASGPAQAGKGR*KMRSTSLSPWRKKPPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAA 522 L++ QAGK R R +P R S RRS AR R S PT PP R P Sbjct: 3561 LRSPPKRQAGKVRRAPRRRPCNPSRAPSTSCACRRSPARRRCSSPTPPPRAPSRAWWPTG 3740 Query: 521 NPAPVPIMACSKRGAAASRRENMP 450 + P A + + +++ MP Sbjct: 3741 STRSSPASASASSASCSTQCRWMP 3812>gi|15823997|dbj|AB070942.1|AB070942 Streptomyces avermitilis polyketide-2 biosynthetic gene cluster Length = 27522 Score = 35.4 bits (71), Expect(2) = 0.007 Identities = 15/34 (44%), Positives = 17/34 (49%) Frame = -1 / +1 Query: 575 SQPTAPPTPMQRFLLPAANPAPVPIMACSKRGAA 474 S T PP P R+ P P P AC +RGAA Sbjct: 856 SSSTRPPGPTSRWRPPGPPPPSTPPTACRRRGAA 957Score = 28.1 bits (55), Expect(3) = 2.0 Identities = 13/31 (41%), Positives = 17/31 (53%) Frame = +1 / -2 Query: 475 AAPRLLHAMIGTGAGFAAGNKNLCIGVGGAV 567 AAPR HA+ G G G ++ +G GG V Sbjct: 956 AAPRRRHAVGGVLGGGGPGGRHRDVGPGGRV 864Score = 26.7 bits (52), Expect(3) = 2.0 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 / -3 Query: 265 AGMRWCFVPTVLARSARRNTSSCGRRCSI 351 AG C P ARS R T+ CG R ++ Sbjct: 19150 AGCAGCRRPGGAARSPPRRTAWCGPRAAV 19064Score = 26.3 bits (51), Expect(3) = 2.0 Identities = 9/23 (39%), Positives = 10/23 (43%) Frame = +2 / -3 Query: 416 PXCCARRRDVLSAYSPCATRLRP 484 P C RRR + PC R P Sbjct: 14380 PACARRRRPATTRRRPCGARCSP 14312Score = 24.9 bits (48), Expect(2) = 0.007 Identities = 11/31 (35%), Positives = 13/31 (41%) Frame = -1 / +1 Query: 485 RGAAASRRENMPIKHPCGARSXRXSXTGHSA 393 RG A R E+ P PC R +SA Sbjct: 982 RGRAVPRAESGPRVRPCPRRRRSACLGDYSA 1074>gi|5123647|emb|AL079345.1|SCE68 Streptomyces coelicolor cosmid E68 Length = 38084 Score = 35.0 bits (70), Expect(3) = 0.007 Identities = 20/71 (28%), Positives = 25/71 (35%) Frame = -1 / +1 Query: 629 RKKPPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPVPIMACSKRGAAASRRENMP 450 R P C RR+R S+ A P R P A P P P + P Sbjct: 28453 RSPAPRRCTRRTRTPPPASRGAARPRSSPRAARPRATPPPPPPPTARRSARTPRASRRRP 28632 Query: 449 IKHPCGARSXR 417 + P AR+ R Sbjct: 28633 GRRPSRARTNR 28665Score = 30.8 bits (61), Expect(2) = 4.3 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -3 / +2 Query: 348 RTPSATTACISPC*ARQNGGHKAPPHPSTSPR*AKDTLPYRFAAYRRNAVQIR 190 R PS ++ PC R+ + P P PR A+ P AA+RR + R Sbjct: 15347 RPPSRASSTPPPCRRRRPPRSSSGPRPYGRPRSARPRPPRPAAAHRRTRARRR 15505Score = 28.6 bits (56), Expect(3) = 0.007 Identities = 13/32 (40%), Positives = 16/32 (49%) Frame = -3 / +2 Query: 348 RTPSATTACISPC*ARQNGGHKAPPHPSTSPR 253 R+P A A +P R G P P+TSPR Sbjct: 31361 RSPRAVAAPSAPARGRARGAWHHPCSPATSPR 31456Score = 27.6 bits (54), Expect(2) = 4.3 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 / +3 Query: 620 PPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAA 522 PP+ +RR+R R + +A P P +R PA+ Sbjct: 7893 PPTPARRRARCRSTRRRGSARPRPCRRSRSPAS 7991Score = 27.6 bits (54), Expect(3) = 0.007 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -1 / +2 Query: 836 RREQL*YRPASNADHRRRP*IHSQRRV*IRGIRANKKPPDGGFFTLKASGPAQAGKGR 663 RR + R R+R + V +RG R + PP GG G +AG GR Sbjct: 21524 RRGRRARRSVLRTGRRKRRRRQTSAVVLVRGRRHHPPPPGGGQRQRPHDGAGRAGPGR 21697>gi|5139638|emb|X81885.2|SFTYLORF Streptomyces fradiae tylMIII(orf1*), tylMII(orf2*), tylMI(orf3*) and ccr(orf4*) genes Length = 4986 Score = 29.0 bits (57), Expect(3) = 0.008 Identities = 22/73 (30%), Positives = 29/73 (39%) Frame = -1 / -2 Query: 683 AQAGKGR*KMRSTSLSPWRKKPPSGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPVP 504 A G GR + R + + R + P+ R R R + PP P R L PAP Sbjct: 1760 AGRGPGRRRSR*RTRARTRCRRPARRSVRRR*SCR*GRAARPPAPRVRPLSGPRRPAPGC 1581 Query: 503 IMACSKRGAAASR 465 C R +A R Sbjct: 1580 SSGCCARYRSAVR 1542Score = 24.4 bits (47), Expect(3) = 0.008 Identities = 17/63 (26%), Positives = 24/63 (37%) Frame = -3 / -3 Query: 279 PPHPSTSPR*AKDTLPYRFAAYRRNAVQIRPHSNAAARPVWQRHSCSA*NSTNAWGLSSS 100 P ST R + P + +R+A +RP S +R C + S WG S Sbjct: 1447 PRPRSTGDRRTRTAGPAGRSPGKRSASALRPASAVRRTSGPERRKCRSSGSPWGWGPPSE 1268 Query: 99 PSR 91 R Sbjct: 1267 ARR 1259Score = 22.6 bits (43), Expect(3) = 0.008 Identities = 10/28 (35%), Positives = 12/28 (42%) Frame = -3 / -2 Query: 360 CIAYRTPSATTACISPC*ARQNGGHKAP 277 C YR+ +A P A GGH P Sbjct: 1568 CARYRSAVRASAVSLPVRAVLGGGHPVP 1485>gi|7981385|emb|AL353815.2|SCD6 Streptomyces coelicolor cosmid D6 Length = 40969 Score = 34.5 bits (69), Expect(2) = 0.009 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = -1 / +1 Query: 614 SGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPVPIMACSKRGAAAS 468 + C R S R+ P AP P R P + AP P A +R S Sbjct: 331 TSCARSSSPACRWRPPAAPTRPTSRRSSPRTSSAPAPTTAVRRRRGCPS 477Score = 25.3 bits (49), Expect(2) = 0.009 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = -3 / +1 Query: 348 RTPSATTACISPC*ARQNGGHKAPPHPSTS 259 R +A TA P A + H+ P P T+ Sbjct: 538 RPAAAATATARPAPALPSTRHRCRPRPRTT 627>gi|13568429|dbj|D45382.2|STMAFSK1 Streptomyces coelicolor genes for KbpA, afsK, orfB and afsS, complete cds Length = 8199 Score = 34.5 bits (69), Expect(2) = 0.010 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = -1 / +1 Query: 614 SGCQRRSRARLRFSQPTAPPTPMQRFLLPAANPAPVPIMACSKRGAAAS 468 + C R S R+ P AP P R P + AP P A +R S Sbjct: 2206 TSCARSSSPACRWRPPAAPTRPTSRRSSPRTSSAPAPTTAVRRRRGCPS 2352Score = 25.3 bits (49), Expect(2) = 0.010 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = -3 / +1 Query: 348 RTPSATTACISPC*ARQNGGHKAPPHPSTS 259 R +A TA P A + H+ P P T+ Sbjct: 2413 RPAAAATATARPAPALPSTRHRCRPRPRTT 2502>gi|14021442|dbj|AP002995.2|AP002995 Mesorhizobium loti DNA, complete genome, section 2/21 Length = 346897 Score = 36.8 bits (74), Expect(2) = 0.010 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 / -3 Query: 316 ALLSAPERWAQSTTASQHISPLSER 242 AL+S PERWA STT S +P + R Sbjct: 192278 ALISEPERWAASTTTSPRAAPATRR 192204Score = 34.1 bits (68), Expect(2) = 0.010 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -1 / -2 Query: 650 STSLSPWRKKPPSGCQRRSRARLRFSQPTAPPTPM 546 S+S +P +K S +RR +ARL S PT PP P+ Sbjct: 284304 SSSRAPTPRK*NSSIRRRRKARLPRSSPTLPP*PI 284200Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) Posted date: Feb 7, 2002 11:33 PM Number of letters in database: 555,281,466 Number of sequences in database: 0 Lambda K H 0.318 0.135 0.401 Matrix: BLOSUM62 Number of Hits to DB: 863,935,167 Number of Sequences: 0 Number of extensions: 16866497 Number of successful extensions: 1674450 Number of sequences better than 10.0: 771 length of database: 121,283,083 effective HSP length: 52 effective length of database: 114,841,219 effective search space used: 26068956713 frameshift window, decay const: 50, 0.5 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 0 ( 0.0 bits) S1: 41 (21.7 bits)