BLASTX 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.RID: 1037799928-014209-23181
Query= 7F1_131_132_BLASTX (1053 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,241,201 sequences; 395,164,443 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQsScore E Sequences producing significant alignments: (bits) Value gi|15598908|ref|NP_252402.1| hypothetical protein [Pseudomo... 157 4e-57 gi|22977131|gb|ZP_00022954.1| hypothetical protein [Ralston... 97 4e-24 gi|23007790|gb|ZP_00049507.1| hypothetical protein [Magneto... 37 0.22 gi|23106243|gb|ZP_00092697.1| hypothetical protein [Azotoba... 35 0.63 gi|23105240|gb|ZP_00091698.1| hypothetical protein [Azotoba... 33 2.4 gi|150952|gb|AAA25681.1| ant(3')-Ia 33 2.4 gi|21241911|ref|NP_641493.1| conserved hypothetical protein... 32 4.1 gi|22989751|gb|ZP_00034804.1| hypothetical protein [Burkhol... 32 4.1 gi|22956451|gb|ZP_00004223.1| hypothetical protein [Rhodoba... 32 4.1 gi|23018587|gb|ZP_00058302.1| hypothetical protein [Thermob... 32 5.4 gi|21321598|gb|AAM47273.1|AF512431_3 peptide synthetase Scp... 32 7.0 gi|22995973|gb|ZP_00040251.1| hypothetical protein [Xylella... 32 7.0 gi|23014243|gb|ZP_00054070.1| hypothetical protein [Magneto... 31 9.1 gi|22995972|gb|ZP_00040250.1| hypothetical protein [Xylella... 31 9.1 gi|19553434|ref|NP_601436.1| galactokinase [Corynebacterium... 31 9.1 gi|17402515|dbj|BAB78723.1| phaF [Pseudomonas chlororaphis] 31 9.1 gi|2317862|gb|AAB66506.1| tylactone synthase modules 4 & 5 ... 31 9.1 gi|7479083|pir||T28678 polyketide synthase - Streptomyces a... 31 9.1Alignments >gi|15598908|ref|NP_252402.1| hypothetical protein [Pseudomonas aeruginosa PA01] gi|11349969|pir||A83182 hypothetical protein PA3713 [imported] - Pseudomonas aeruginosa (strain PAO1) gi|9949878|gb|AAG07100.1|AE004790_5 hypothetical protein [Pseudomonas aeruginosa PA01] Length = 620 Score = 157 bits (397), Expect(2) = 4e-57 Identities = 73/131 (55%), Positives = 95/131 (72%) Frame = +1 Query: 523 AKFDYSQLDRPESPVKLRLNSTGLHAANVGDKVEVTYMTGEKMTKVRAGQVVMAGYNMMI 702 A+FDYS+LD PV+LRLNST + N V+V Y ++ +VR VMA YNMM+ Sbjct: 359 ARFDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGRLHRVRGKHCVMACYNMMV 418 Query: 703 PYLVPEMSHEQQEALKQNVKAPLVYSKVVIRNWQPFIKLGVHEIYSPAAPYSRVKLDYPV 882 PYL+ ++S EQ AL QNVK PLVY+KV++RNWQ + LG+HEIY+P PYSR+KLD+PV Sbjct: 419 PYLLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYSRIKLDFPV 478 Query: 883 SMGGYQHPRDP 915 +G Y+HPRDP Sbjct: 479 DLGSYRHPRDP 489Score = 85.9 bits (211), Expect(2) = 4e-57 Identities = 49/141 (34%), Positives = 67/141 (47%) Frame = +3 Query: 78 RXTGXSYEAFXXXFPXAGKRSPGADRAAYGXXXXXXXXXXXXXXXXXXXPTSYTQFXREK 257 R S+ AF FP + + A A Y TSY + + Sbjct: 207 RLNARSWRAFIGDFPLS-REDREALIALYESPRDYLAGKSVEEKETYLAKTSYRDYLLKN 265 Query: 258 VGXSELAIRYFQQTTNDFQXVGIDGTSCSDARICDXXXXXXXXXXXXDEESQADLDDPYV 437 VG SE +++YFQ +NDF +G D +DA EE+QA++D+PY+ Sbjct: 266 VGLSETSVKYFQGRSNDFSALGADALPAADAYAAGFPGFDALGLPQPSEEAQAEMDEPYI 325 Query: 438 FHFPDGNATLARLMVRKHDPA 500 +HFPDGNA+LARLMVR PA Sbjct: 326 YHFPDGNASLARLMVRDLIPA 346>gi|22977131|gb|ZP_00022954.1| hypothetical protein [Ralstonia metallidurans] Length = 712 Score = 97.4 bits (241), Expect(2) = 4e-24 Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Frame = +1 Query: 484 ASMIPRSAGRQRQ----AKFDYSQLDRPESPVKLRLNSTGLHAANVGDKVEVTYMTGEKM 651 + ++P A Q Q A+FDYS+LDR +PV++RLNST + VTY + Sbjct: 439 SKLVPGVAAAQGQEIVGARFDYSKLDREGNPVRIRLNSTAIAIEPDVRITRVTYGWQGNL 498 Query: 652 TKVRAGQVVMAGYNMMIPYLVPEMSHEQQEALKQNVKAPLVYSKVVIRNWQPFIKLGVHE 831 +V A VV+AGY+MM+P+++P + + AL+ VKAPLVY+KV + NW+ F L Sbjct: 499 QRVEAAHVVVAGYDMMVPFILPSLPVPAKAALRACVKAPLVYTKVALDNWRAFDALKTWR 558 Query: 832 IYSPAAPYSRVKLD 873 I++P YS + L+ Sbjct: 559 IHAPTMAYSDLWLE 572Score = 35.4 bits (80), Expect(2) = 4e-24 Identities = 25/90 (27%), Positives = 34/90 (37%) Frame = +3 Query: 228 TSYTQFXREKVGXSELAIRYFQQTTNDFQXVGIDGTSCSDARICDXXXXXXXXXXXXDEE 407 T Y F REK G +R+ + + D + DG + + A D Sbjct: 356 TRYAVFLREKAGLGLPGLRFLRSRSQDAYALDADGITVAQAISIGLPAGAGMAAPAIDP- 414 Query: 408 SQADLDDPYVFHFPDGNATLARLMVRKHDP 497 + FPDGNATLAR + K P Sbjct: 415 -RLGKSPASRLWFPDGNATLARALASKLVP 443>gi|23007790|gb|ZP_00049507.1| hypothetical protein [Magnetospirillum magnetotacticum] Length = 340 Score = 36.6 bits (83), Expect = 0.22 Identities = 24/70 (34%), Positives = 29/70 (41%) Frame = -1 Query: 513 PAGAPRDHACAPSGAPAWRCRPGSGTRKDRRDPPATLRPAAADSCRRGPADXXXXXXXXX 334 P+G+PR AP G+ A CRP + K RR P A RP + S PA Sbjct: 266 PSGSPRSRPRAPPGSAA--CRPSPSSAKARRKPRA--RPPRSSSPSACPARASAARSGTS 321 Query: 333 XXXCPPXGSR 304 P SR Sbjct: 322 GAASSPMPSR 331>gi|23106243|gb|ZP_00092697.1| hypothetical protein [Azotobacter vinelandii] Length = 4332 Score = 35.0 bits (79), Expect = 0.63 Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 10/125 (8%) Frame = -1 Query: 609 DVGRVQPGA---V*TQLHRRLRPIELAVVEFGLSLPAGAPRDHACAPSGAPAWRCRPGSG 439 D RV+PG + RLR + L + LPA R A G A R P G Sbjct: 1305 DAPRVRPGCFRRAAAEGAARLRRVGLGM------LPAADRRQPPGAGGGWRAPRPAPAGG 1358 Query: 438 TRKDRRDPPATLRPAAADSCRRG-------PADXXXXXXXXXXXXCPPXGSRWWSAGNTG 280 T R LR AAA + RRG P P G+R +AG Sbjct: 1359 TGTGARGDLPALRAAAAATVRRGTGARRLPPPQAAVLRRRGALRRAVPAGARTAAAGRAA 1418 Query: 279 SPARS 265 P R+ Sbjct: 1419 QPLRA 1423>gi|23105240|gb|ZP_00091698.1| hypothetical protein [Azotobacter vinelandii] Length = 864 Score = 33.1 bits (74), Expect = 2.4 Identities = 25/68 (36%), Positives = 29/68 (42%) Frame = -3 Query: 1024 SXERVPTTARPFARLLARAEPLPQRRHDTICRPIADPDRAGAGTRPCSLGSPASRGCTAR 845 S RVP P RAE +P RR + R GAG R L PA G + R Sbjct: 56 SLRRVPAPQAP-----PRAETVPGRRQAGVLR--------GAGHRQGRLQRPAGDGFSGR 102 Query: 844 PANKFRAR 821 PA + R R Sbjct: 103 PAARLRCR 110>gi|150952|gb|AAA25681.1| ant(3')-Ia Length = 180 Score = 33.1 bits (74), Expect = 2.4 Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Frame = -1 Query: 546 ELAVVEFGLSLPAGAPRDHACAPSGA---PAWRCRPGSGTRKDRRDPP-ATLRPA 394 E A ++ L AG P H C A P WR PGS R+ RRDP LRPA Sbjct: 123 EPATIDIDLGAAAGGP-GHRCLAGVACLRPGWRGHPGS-LRERRRDPEHPALRPA 175>gi|21241911|ref|NP_641493.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107299|gb|AAM36029.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 154 Score = 32.3 bits (72), Expect = 4.1 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 1005 QQRGPLRDCSRGLSRCRS-VGTTPYAGRLPIRIARVLVPAHAHWVVQL 865 Q+R D + CR+ TP RL +A VL+P HAHW++QL Sbjct: 32 QRRAVFADFLLAATACRAFTAATPCDARL---LAWVLMPDHAHWLLQL 76>gi|22989751|gb|ZP_00034804.1| hypothetical protein [Burkholderia fungorum] Length = 542 Score = 32.3 bits (72), Expect = 4.1 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = -1 Query: 513 PAGAPRDHACAPSGAPAWRCRPGSGTRKD--RRDPPATLRPAAADS 382 P G HAC S A+R R T D R DP ATL PAA D+ Sbjct: 289 PLGPAFVHACVESTKLAFRIRDEHVTDPDHMRIDPQATLEPAALDA 334>gi|22956451|gb|ZP_00004223.1| hypothetical protein [Rhodobacter sphaeroides] Length = 484 Score = 32.3 bits (72), Expect = 4.1 Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 1/96 (1%) Frame = -1 Query: 651 HLLAGHIGDFHLVADVGRVQPGAV*TQ-LHRRLRPIELAVVEFGLSLPAGAPRDHACAPS 475 H AGH GD + D+ QPG V + L RR R + + LPAG R H Sbjct: 28 HPAAGHAGDHLVAPDLLHDQPGRVHHRLLPRRHRAHAADLHLLAVPLPAGGARHHGTRHG 87 Query: 474 GAPAWRCRPGSGTRKDRRDPPATLRPAAADSCRRGP 367 R R R PP RP RR P Sbjct: 88 A----RRLLDRAARHCRIFPPPRPRPVRRQGYRRLP 119>gi|23018587|gb|ZP_00058302.1| hypothetical protein [Thermobifida fusca] Length = 767 Score = 32.0 bits (71), Expect = 5.4 Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 14/64 (21%) Frame = -1 Query: 519 SLPAGAPR-------DHACAPSGAPAWRCRPGSGT----RKDRRDPPATL---RPAAADS 382 SL G PR D C P+ R RPG GT R RRD P ++ PA D+ Sbjct: 58 SLLWGVPRRLGAGTVDGQCGPARQGCCRVRPGRGTQGPRRGSRRDHPDSMHRTEPAGVDA 117 Query: 381 CRRG 370 RG Sbjct: 118 VHRG 121>gi|21321598|gb|AAM47273.1|AF512431_3 peptide synthetase ScpsB [Saccharothrix mutabilis subsp. capreolus] Length = 6193 Score = 31.6 bits (70), Expect = 7.0 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = +1 Query: 673 VVMAGYNMMIPYLVPEMSHEQQEALKQNVKAPLVYSKVVIRNWQPFIKLGVHEIYSPAAP 852 VV+ ++ Y+ E + ++ LK ++ +V S VV P SP+ Sbjct: 2266 VVVVRSGRLVGYVTGEPETDARDHLKASLPDYMVPSAVVAVEAFPL---------SPSGK 2316 Query: 853 YSRVKLDYPVSMGGYQHPRDP-DRQSACIW 939 + L P GG+Q PR P +R A IW Sbjct: 2317 LDKKALPEPEFGGGFQEPRTPAERTIAAIW 2346>gi|22995973|gb|ZP_00040251.1| hypothetical protein [Xylella fastidiosa Ann-1] Length = 281 Score = 31.6 bits (70), Expect = 7.0 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 121 PRPESDRQALIALHTGGERLSXXXXXXXEGXVARXPQATPSSCVKKW 261 PRP S+R A I G + + +G V R P TP V KW Sbjct: 107 PRPVSERAAFI----GSQYSNTSNTYQPDGTVLRNPDGTPQKQVDKW 149>gi|23014243|gb|ZP_00054070.1| hypothetical protein [Magnetospirillum magnetotacticum] Length = 217 Score = 31.2 bits (69), Expect = 9.1 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 Query: 403 KSRRRISTILTCSTSRTATPRWRA*WCAS 489 +SR R + + + SR++ PRW A WCA+ Sbjct: 11 RSRPRWARAIPIAASRSSAPRWAANWCAT 39>gi|22995972|gb|ZP_00040250.1| hypothetical protein [Xylella fastidiosa Ann-1] Length = 280 Score = 31.2 bits (69), Expect = 9.1 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 121 PRPESDRQALIALHTGGERLSXXXXXXXEGXVARXPQATPSSCVKKW 261 PRP S+R A I G + + +G V R P TP V KW Sbjct: 107 PRPVSERAAFI----GSQYSNTSNTYQPDGTVLRNPDGTPQKQVVKW 149>gi|19553434|ref|NP_601436.1| galactokinase [Corynebacterium glutamicum ATCC 13032] gi|21325004|dbj|BAB99626.1| Galactokinase [Corynebacterium glutamicum ATCC 13032] Length = 431 Score = 31.2 bits (69), Expect = 9.1 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 405 ESQADLDDPYVFHFPDGNATLARLMVRKHDPAERRPAKTGQIRLQPARSA 554 ESQ DL D F FP + LARL V + A R + G I L A A Sbjct: 358 ESQDDLSD--TFDFPPADLALARLCVERGATAARSTSARGVIALVDAHHA 405>gi|17402515|dbj|BAB78723.1| phaF [Pseudomonas chlororaphis] Length = 275 Score = 31.2 bits (69), Expect = 9.1 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -3 Query: 1000 ARPFARLLARAEPLPQRRHDTICRPIADPDRAGAGTRPCSLGSPASRGCTARPANKFRAR 821 A+P A+ A A+P + +P A P A +P + PA++ A+PA K A+ Sbjct: 153 AKPLAK--AAAKPAAKAPAKAAAKPAAKPAAKTAAAKPAA--KPAAKPVAAKPAAKPAAK 208 Query: 820 PA 815 PA Sbjct: 209 PA 210>gi|2317862|gb|AAB66506.1| tylactone synthase modules 4 & 5 [Streptomyces fradiae] Length = 3729 Score = 31.2 bits (69), Expect = 9.1 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 513 PAGAPRDHACAPSGAPAWRCRPGSGTRKDRRDPPA 409 PAG + P+G AWR PG GT ++ PA Sbjct: 2936 PAGPGPEDLVPPAGTTAWRLTPGGGTLEELSLAPA 2970>gi|7479083|pir||T28678 polyketide synthase - Streptomyces ambofaciens (fragment) gi|1228093|emb|CAA87011.1| polyketide synthase [Streptomyces ambofaciens] Length = 1198 Score = 31.2 bits (69), Expect = 9.1 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = -3 Query: 1015 RVPTTARPFARLLARAEPLPQ----RRHDTICRPIADPDRAGAGTRPCSLGSPASRGCTA 848 R P + RP R + P P+ RR CRP A TR P+ G T Sbjct: 519 RSPASGRPSTRATSSPWPPPRASTRRRWSPCCRPCRPGTATPASTR------PSVPGGTG 572 Query: 847 RPANKFRARP 818 P + +R+RP Sbjct: 573 SPGSPWRSRP 582
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
Posted date: Nov 18, 2002 11:33 PM
Number of letters in database: 395,164,443
Number of sequences in database: 1,241,201
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,528,205
Number of Sequences: 1241201
Number of extensions: 4074881
Number of successful extensions: 13444
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 12763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13433
length of database: 137,611,225
effective HSP length: 116
effective length of database: 85,876,269
effective search space used: 20095046946
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)