Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.RID: 1015586814-16928-31841
Query= 23E6_131_132_BLASTX (829 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 891,607 sequences; 279,182,324 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQsScore E Sequences producing significant alignments: (bits) Value gi|16123771|ref|NP_407084.1| (NC_003143) putative xanthine/... 162 1e-39 gi|15803421|ref|NP_289454.1| (NC_002655) Z4223 gene product... 154 2e-37 gi|16130787|ref|NP_417361.1| (NC_000913) putative oxidoredu... 154 2e-37 gi|16767518|ref|NP_463133.1| (NC_003197) putative xanthine/... 152 8e-37 gi|16762949|ref|NP_458566.1| (NC_003198) putative xanthine/... 152 8e-37 gi|15804656|ref|NP_290697.1| (NC_002655) orf, hypothetical ... 151 2e-36 gi|15602152|ref|NP_245224.1| (NC_002663) unknown [Pasteurel... 143 6e-34 gi|16272095|ref|NP_438297.1| (NC_000907) conserved hypothet... 143 6e-34 gi|17545474|ref|NP_518876.1| (NC_003295) PROBABLE TRANSMEMB... 141 2e-33 gi|3327028|emb|CAA06848.1| (AJ006085) hypothetical membrane... 138 2e-32 gi|16123772|ref|NP_407085.1| (NC_003143) putative putative... 108 1e-23 gi|16762950|ref|NP_458567.1| (NC_003198) putative sodium/hy... 105 2e-22 gi|16131891|ref|NP_418489.1| (NC_000913) orf, hypothetical ... 102 1e-21 gi|15804657|ref|NP_290698.1| (NC_002655) orf, hypothetical ... 102 1e-21 gi|15834301|ref|NP_313074.1| (NC_002695) hypothetical prote... 102 1e-21 gi|16767519|ref|NP_463134.1| (NC_003197) putative CPA1 fami... 102 1e-21 gi|15792692|ref|NP_282515.1| (NC_002163) putative transmemb... 60 7e-09 gi|290513|gb|AAA62016.1| (L10328) f470 [Escherichia coli] 59 1e-08 gi|16131534|ref|NP_418120.1| (NC_000913) orf, hypothetical ... 59 1e-08 gi|15804259|ref|NP_290298.1| (NC_002655) Z5153 gene product... 59 2e-08 gi|15833854|ref|NP_312627.1| (NC_002695) hypothetical prote... 59 2e-08 gi|15896027|ref|NP_349376.1| (NC_003030) Permease [Clostrid... 57 5e-08 gi|15599913|ref|NP_253407.1| (NC_002516) probable transport... 57 6e-08 gi|16264533|ref|NP_437325.1| (NC_003078) putative integral ... 56 1e-07 gi|17988963|ref|NP_541596.1| (NC_003318) XANTHINE/URACIL PE... 55 2e-07 gi|15896075|ref|NP_349424.1| (NC_003030) Predicted permease... 55 2e-07 gi|16804293|ref|NP_465778.1| (NC_003210) similar to unknown... 55 2e-07 gi|16801419|ref|NP_471687.1| (NC_003212) similar to unknown... 55 2e-07 gi|16124215|ref|NP_407528.1| (NC_003143) Xanthine/uracil pe... 53 9e-07 gi|15643360|ref|NP_228404.1| (NC_000853) conserved hypothet... 53 1e-06 gi|15642276|ref|NP_231909.1| (NC_002505) conserved hypothet... 51 3e-06 gi|18310733|ref|NP_562667.1| (NC_003366) conserved hypothet... 50 6e-06 gi|16080051|ref|NP_390877.1| (NC_000964) similar to hypothe... 50 7e-06 gi|16802616|ref|NP_464101.1| (NC_003210) conserved hypothet... 50 1e-05 gi|16799657|ref|NP_469925.1| (NC_003212) conserved hypothet... 50 1e-05 gi|18310557|ref|NP_562491.1| (NC_003366) conserved hypothet... 50 1e-05 gi|13476934|ref|NP_108503.1| (NC_002678) Na+:H+ antiporter ... 49 2e-05 gi|17549897|ref|NP_523237.1| (NC_003296) PROBABLE TRANSMEMB... 49 2e-05 gi|17976848|emb|CAD12648.1| (AJ420783) hypothetical protein... 49 2e-05 gi|18311564|ref|NP_563498.1| (NC_003366) conserved hypothet... 49 2e-05 gi|15598856|ref|NP_252350.1| (NC_002516) probable sodium/hy... 49 2e-05 gi|4520375|dbj|BAA75912.1| (AB024601) similar to YJCE-ECOLI... 48 4e-05 gi|15645789|ref|NP_207966.1| (NC_000915) conserved hypothet... 47 8e-05 gi|15612167|ref|NP_223819.1| (NC_000921) putative [Helicoba... 47 8e-05 gi|13937467|gb|AAK50278.1|U66917_46 (U66917) putative trans... 47 8e-05 gi|15676340|ref|NP_273476.1| (NC_003112) conserved hypothet... 45 2e-04 gi|15794934|ref|NP_284756.1| (NC_003116) conserved hypothet... 45 2e-04 gi|8249987|emb|CAB93408.1| (AL357524) putative integral mem... 44 7e-04 gi|15602379|ref|NP_245451.1| (NC_002663) unknown [Pasteurel... 43 0.001 gi|15614593|ref|NP_242896.1| (NC_002570) BH2030~unknown con... 43 0.001Alignments >gi|16123771|ref|NP_407084.1| (NC_003143) putative xanthine/uracil permease [Yersinia pestis] gi|15981550|emb|CAC93098.1| (AJ414158) putative xanthine/uracil permease [Yersinia pestis] Length = 451 Score = 162 bits (409), Expect = 1e-39 Identities = 79/86 (91%), Positives = 84/86 (96%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV+KLDF DFVDAM+GLLCAVFIVLTCNIVTGIMLGFSSLVIGR+ SG Sbjct: 366 PALMYVGLLMLSNVSKLDFEDFVDAMSGLLCAVFIVLTCNIVTGIMLGFSSLVIGRVCSG 425 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EWRKLN+GTV+IAVALVAFYAGGWAI Sbjct: 426 EWRKLNVGTVIIAVALVAFYAGGWAI 451>gi|15803421|ref|NP_289454.1| (NC_002655) Z4223 gene product [Escherichia coli O157:H7 EDL933] gi|15833011|ref|NP_311784.1| (NC_002695) putative oxidoreductase [Escherichia coli O157:H7] gi|12517408|gb|AAG58013.1|AE005518_7 (AE005518) Z4223 gene product [Escherichia coli O157:H7 EDL933] gi|13363229|dbj|BAB37180.1| (AP002563) putative oxidoreductase [Escherichia coli O157:H7] Length = 455 Score = 154 bits (390), Expect = 2e-37 Identities = 73/86 (84%), Positives = 82/86 (94%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV+KLDFNDF+DAMAGL+CAVFIVLTCNIVTGIMLGF +LV+GR+F+ Sbjct: 370 PALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVTLVVGRVFAR 429 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EW+KLNIGTV+I ALVAFYAGGWAI Sbjct: 430 EWQKLNIGTVIITAALVAFYAGGWAI 455>gi|16130787|ref|NP_417361.1| (NC_000913) putative oxidoreductase [Escherichia coli K12] gi|2495658|sp|Q46818|YGFR_ECOLI Hypothetical protein ygfR gi|7466473|pir||E65072 hypothetical protein b2885 - Escherichia coli (strain K-12) gi|887835|gb|AAA83066.1| (U28375) ORF_o276 [Escherichia coli] gi|1789251|gb|AAC75923.1| (AE000372) putative oxidoreductase [Escherichia coli K12] Length = 276 Score = 154 bits (390), Expect = 2e-37 Identities = 73/86 (84%), Positives = 82/86 (94%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV+KLDFNDF+DAMAGL+CAVFIVLTCNIVTGIMLGF +LV+GR+F+ Sbjct: 191 PALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVTLVVGRVFAR 250 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EW+KLNIGTV+I ALVAFYAGGWAI Sbjct: 251 EWQKLNIGTVIITAALVAFYAGGWAI 276>gi|16767518|ref|NP_463133.1| (NC_003197) putative xanthine/uracil permease family [Salmonella typhimurium LT2] gi|16422828|gb|AAL23092.1| (AE008900) putative xanthine/uracil permease family [Salmonella typhimurium LT2] Length = 449 Score = 152 bits (385), Expect = 8e-37 Identities = 74/86 (86%), Positives = 82/86 (95%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV K+DF DFVDAMAGL+ AVFIVLTCNIVTGIM+GF++LV+GR+ SG Sbjct: 364 PALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVVGRLVSG 423 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EWRKLNIGTV+IAVALVAFYAGGWAI Sbjct: 424 EWRKLNIGTVVIAVALVAFYAGGWAI 449>gi|16762949|ref|NP_458566.1| (NC_003198) putative xanthine/uracil permeases family protein [Salmonella enterica subsp. enterica serovar Typhi] gi|16505256|emb|CAD09252.1| (AL627282) putative xanthine/uracil permeases family protein [Salmonella enterica subsp. enterica serovar Typhi] Length = 449 Score = 152 bits (385), Expect = 8e-37 Identities = 74/86 (86%), Positives = 82/86 (95%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV K+DF DFVDAMAGL+ AVFIVLTCNIVTGIM+GF++LV+GR+ SG Sbjct: 364 PALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVVGRLVSG 423 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EWRKLNIGTV+IAVALVAFYAGGWAI Sbjct: 424 EWRKLNIGTVVIAVALVAFYAGGWAI 449>gi|15804656|ref|NP_290697.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933] gi|15834300|ref|NP_313073.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7] gi|16131890|ref|NP_418488.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12] gi|418552|sp|P32702|YJCD_ECOLI Hypothetical protein yjcD gi|7446796|pir||G65214 hypothetical 45.7 kD protein in soxR-acs intergenic region - Escherichia coli (strain K-12) gi|396399|gb|AAC43158.1| (U00006) matches PS00017: ATP/GTP-binding site motif A [Escherichia coli] gi|1790499|gb|AAC77034.1| (AE000479) orf, hypothetical protein [Escherichia coli K12] gi|12519018|gb|AAG59262.1|AE005639_6 (AE005639) orf, hypothetical protein [Escherichia coli O157:H7 EDL933] gi|13364523|dbj|BAB38469.1| (AP002568) hypothetical protein [Escherichia coli O157:H7] Length = 449 Score = 151 bits (382), Expect = 2e-36 Identities = 74/86 (86%), Positives = 81/86 (94%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV K+DF DFVDAMAGL+ AVFIVLTCNIVTGIM+GF++LVIGR+ SG Sbjct: 364 PALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRLVSG 423 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EWRKLNIGTV+IAVALV FYAGGWAI Sbjct: 424 EWRKLNIGTVVIAVALVTFYAGGWAI 449>gi|15602152|ref|NP_245224.1| (NC_002663) unknown [Pasteurella multocida] gi|12720519|gb|AAK02371.1| (AE006063) unknown [Pasteurella multocida] Length = 437 Score = 143 bits (360), Expect = 6e-34 Identities = 70/86 (81%), Positives = 81/86 (93%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV+KLDF+DF+ AM+GL+CAVFIVLT NIVTGIMLGF++LVIGR+ SG Sbjct: 352 PALMYVGLLMLSNVSKLDFDDFIGAMSGLVCAVFIVLTANIVTGIMLGFAALVIGRVVSG 411 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 E +KLN+GTVLIA+ALVAFYA GWAI Sbjct: 412 EVKKLNVGTVLIAIALVAFYAFGWAI 437>gi|16272095|ref|NP_438297.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae Rd] gi|1176347|sp|P44530|YJCD_HAEIN Hypothetical protein HI0125 gi|1074272|pir||C64143 hypothetical protein HI0125 - Haemophilus influenzae (strain Rd KW20) gi|1573080|gb|AAC21799.1| (U32698) conserved hypothetical protein [Haemophilus influenzae Rd] Length = 438 Score = 143 bits (360), Expect = 6e-34 Identities = 69/86 (80%), Positives = 81/86 (93%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV+KLDF+DFV AM+GL+CAVFIVLT NIVTGIMLGF++LVIGRI SG Sbjct: 353 PALMYVGLLMLSNVSKLDFDDFVGAMSGLICAVFIVLTANIVTGIMLGFAALVIGRIVSG 412 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 + ++LN+GTV+IA+ LVAFYAGGWAI Sbjct: 413 DIKRLNVGTVIIAIVLVAFYAGGWAI 438>gi|17545474|ref|NP_518876.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] gi|17427766|emb|CAD14285.1| (AL646060) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] Length = 460 Score = 141 bits (355), Expect = 2e-33 Identities = 67/86 (77%), Positives = 77/86 (88%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLS+V++L +D VDA+AGL+CAVFIVLTCNIVTGIMLGF +LV+GRI +G Sbjct: 375 PALMYVGLLMLSSVSRLHMDDMVDALAGLVCAVFIVLTCNIVTGIMLGFCTLVVGRIVAG 434 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EWRKLN+GTV IAV L FYAGGWAI Sbjct: 435 EWRKLNVGTVAIAVVLATFYAGGWAI 460>gi|3327028|emb|CAA06848.1| (AJ006085) hypothetical membrane protein [Shewanella massilia] Length = 450 Score = 138 bits (347), Expect = 2e-32 Identities = 66/86 (76%), Positives = 74/86 (85%) Frame = -1 Query: 829 PALMYVGLLMLSNVTKLDFNDFVDAMAGLLCAVFIVLTCNIVTGIMLGFSSLVIGRIFSG 650 PALMYVGLLMLSNV KLDF+D VDAMAGL CAVFI+L+CNIVTGIMLGF +LV+GRI SG Sbjct: 365 PALMYVGLLMLSNVAKLDFDDKVDAMAGLTCAVFIILSCNIVTGIMLGFVTLVVGRICSG 424 Query: 649 EWRKLNIGTVLIAVALVAFYAGGWAI 572 EWRKL +G + I + LV FY GGWAI Sbjct: 425 EWRKLKVGVLAITLGLVVFYMGGWAI 450Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 6, 2002 1:29 AM Number of letters in database: 279,182,324 Number of sequences in database: 0 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,526,990 Number of Sequences: 0 Number of extensions: 1768271 Number of successful extensions: 5759 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 5430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5731 length of database: 74,921,317 effective HSP length: 110 effective length of database: 47,886,067 effective search space used: 7901201055 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)