BLASTX 2.2.4 [Aug-26-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1034848907-05497-16179

Query= 22D4_131_132_BLASTX
         (933 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,211,778 sequences; 386,724,011 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22127970|ref|NP_671393.1|  (NC_004088) heat shock protein...   152   2e-36 
gi|16124195|ref|NP_407508.1|  (NC_003143) heat shock protein...   152   2e-36 
gi|16762514|ref|NP_458131.1|  (NC_003198) heat shock protein...   119   2e-28 
gi|16767093|ref|NP_462708.1|  (NC_003197) small heat shock p...   119   2e-28 
gi|15804285|ref|NP_290324.1|  (NC_002655) heat shock protein...   114   2e-26 
gi|124072|sp|P29210|IBPB_ECOLI  16 kDa heat shock protein B ...   114   2e-26 
gi|16124196|ref|NP_407509.1|  (NC_003143) heat shock protein...    74   9e-25 
gi|15804286|ref|NP_290325.1|  (NC_002655) heat shock protein...    79   4e-21 
gi|16762513|ref|NP_458130.1|  (NC_003198) heat shock protein...    78   2e-20 
gi|16126497|ref|NP_421061.1|  (NC_002696) heat shock protein...    88   7e-17 
gi|23030058|gb|ZP_00068325.1|  (NZ_AAAT01000054) hypothetica...    84   7e-16 
gi|23105058|gb|ZP_00091516.1|  (NZ_AAAD01000089) hypothetica...    82   4e-15 
gi|23105057|gb|ZP_00091515.1|  (NZ_AAAD01000089) hypothetica...    82   4e-15 
gi|23062359|gb|ZP_00087148.1|  (NZ_AABA01000155) hypothetica...    80   1e-14 
gi|23013623|gb|ZP_00053496.1|  (NZ_AAAP01003759) hypothetica...    80   1e-14 
gi|23028091|gb|ZP_00066509.1|  (NZ_AAAT01000009) hypothetica...    80   1e-14 
gi|15966576|ref|NP_386929.1|  (NC_003047) PROBABLE HEAT SHOC...    80   2e-14 
gi|15891075|ref|NP_356747.1|  (NC_003063) AGR_L_1921p [Agrob...    79   4e-14 
gi|22959872|gb|ZP_00007517.1|  (NZ_AAAE01000153) hypothetica...    76   5e-14 
gi|2829826|sp|P96193|IBPB_AZOVI  16 KD HEAT SHOCK PROTEIN B ...    78   5e-14 
gi|23103817|gb|ZP_00090291.1|  (NZ_AAAD01000081) hypothetica...    78   5e-14 
gi|15598322|ref|NP_251816.1|  (NC_002516) heat-shock protein...    78   7e-14 
gi|1084054|pir||S49042  global stress protein gspA - Legione...    76   3e-13 
gi|12965134|gb|AAK11469.1|AF323438_1  (AF323438) putative he...    75   3e-13 
gi|23468959|gb|ZP_00124294.1|  (NZ_AABH01000001) hypothetica...    75   4e-13 
gi|15640050|ref|NP_229677.1|  (NC_002505) 16 kDa heat shock ...    75   6e-13 
gi|13488471|ref|NP_109478.1|  (NC_002682) small heat shock p...    73   2e-12 
gi|23012066|gb|ZP_00052244.1|  (NZ_AAAP01003454) hypothetica...    72   4e-12 
gi|22962870|gb|ZP_00010476.1|  (NZ_AAAF01000001) hypothetica...    72   4e-12 
gi|16119280|ref|NP_395986.1|  (NC_003064) AGR_pAT_69p [Agrob...    70   1e-11 
gi|17938640|ref|NP_535428.1|  (NC_003306) small heat shock p...    70   1e-11 
gi|13472665|ref|NP_104232.1|  (NC_002678) small heat shock p...    70   2e-11 
gi|8134495|sp|O69241|HSPD_BRAJA  SMALL HEAT SHOCK PROTEIN HS...    69   2e-11 
gi|22958273|gb|ZP_00005948.1|  (NZ_AAAE01000123) hypothetica...    69   4e-11 
gi|23108903|gb|ZP_00095106.1|  (NZ_AAAV01000149) hypothetica...    68   5e-11 
gi|2829485|sp|P70918|HSPB_BRAJA  SMALL HEAT SHOCK PROTEIN HS...    68   7e-11 
gi|17988386|ref|NP_541019.1|  (NC_003318) HEAT SHOCK PROTEIN...    68   7e-11 
gi|22966758|gb|ZP_00014353.1|  (NZ_AAAG01000004) hypothetica...    67   9e-11 
gi|22965576|gb|ZP_00013174.1|  (NZ_AAAG01000001) hypothetica...    67   9e-11 
gi|16119677|ref|NP_396383.1|  (NC_003064) AGR_pAT_660p [Agro...    67   1e-10 
gi|17939032|ref|NP_535820.1|  (NC_003306) heat-shock protein...    67   1e-10 
gi|23015170|gb|ZP_00054954.1|  (NZ_AAAP01003848) hypothetica...    67   1e-10 
gi|16264547|ref|NP_437339.1|  (NC_003078) putative small hea...    64   2e-10 
gi|13472178|ref|NP_103745.1|  (NC_002678) small heat shock p...    66   2e-10 
gi|8134496|sp|O69242|HSPE_BRAJA  SMALL HEAT SHOCK PROTEIN HS...    66   3e-10 
gi|8134497|sp|O86110|HSPH_BRAJA  SMALL HEAT SHOCK PROTEIN HS...    66   3e-10 
gi|23499818|ref|NP_699258.1|  (NC_004311) 16 kDa heat shock ...    65   5e-10 
gi|16127822|ref|NP_422386.1|  (NC_002696) heat shock protein...    64   1e-09 
gi|23008326|gb|ZP_00049819.1|  (NZ_AAAP01002139) hypothetica...    51   4e-09 
gi|2829484|sp|P70917|HSPA_BRAJA  SMALL HEAT SHOCK PROTEIN HS...    62   5e-09 
gi|23501074|ref|NP_697201.1|  (NC_004310) heat shock protein...    61   9e-09 
gi|17988067|ref|NP_540701.1|  (NC_003317) SMALL HEAT SHOCK P...    60   1e-08 
gi|15964167|ref|NP_384520.1|  (NC_003047) PROBABLE SMALL HEA...    60   2e-08 
gi|13472784|ref|NP_104351.1|  (NC_002678) small heat shock p...    59   3e-08 
gi|16760643|ref|NP_456260.1|  (NC_003198) putative heat shoc...    58   6e-08 
gi|16764603|ref|NP_460218.1|  (NC_003197) putative molecular...    58   6e-08 
gi|15887726|ref|NP_353407.1|  (NC_003062) AGR_C_657p [Agroba...    56   3e-07 
gi|21672819|ref|NP_660886.1|  (NC_004061) heat inducible pro...    55   6e-07 
gi|8134501|sp|Q9Z616|IBP_BUCAP  Small heat shock protein ibp...    55   6e-07 
gi|16763879|ref|NP_459494.1|  (NC_003197) putative heavy met...    54   8e-07 
gi|16759477|ref|NP_455094.1|  (NC_003198) copper efflux regu...    54   1e-06 
gi|16123262|ref|NP_406575.1|  (NC_003143) putative regulator...    52   3e-06 
gi|16128471|ref|NP_415020.1|  (NC_000913) putative transcrip...    51   9e-06 
gi|15829799|ref|NP_308572.1|  (NC_002695) putative transcrip...    51   9e-06 
gi|22594854|gb|AAN02438.1|AF288452_8  (AF288452) putative tr...    51   9e-06 
gi|15800221|ref|NP_286233.1|  (NC_002655) putative transcrip...    51   9e-06 
gi|15617170|ref|NP_240383.1|  (NC_002528) 16 kD heat shock p...    50   1e-05 
gi|23004714|gb|ZP_00047904.1|  (NZ_AAAP01000442) hypothetica...    48   2e-05 
gi|2239050|emb|CAA72698.1|  (Y11966) belongs to hsp20 family...    40   0.021 
gi|10443175|emb|CAC10488.1|  (AJ404864) Ibp protein [Buchner...    37   0.10  
gi|14009663|gb|AAK51703.1|AF320330_1  (AF320330) putative sm...    35   0.39  
gi|23017567|gb|ZP_00057292.1|  (NZ_AAAQ01000026) hypothetica...    35   0.51  
gi|13236194|gb|AAK16088.1|AF288082_6  (AF288082) YcbA [Photo...    35   0.66  
gi|23030057|gb|ZP_00068324.1|  (NZ_AAAT01000054) hypothetica...    34   1.1   
gi|23137380|gb|ZP_00119087.1|  (NZ_AABE01000063) hypothetica...    34   1.1   
gi|23106109|gb|ZP_00092563.1|  (NZ_AAAD01000091) hypothetica...    33   1.5   
gi|22962722|gb|ZP_00010328.1|  (NZ_AAAF01000001) hypothetica...    33   2.5   
gi|14021022|dbj|BAB47646.1|  (AB037671) orf2 [Staphylococcus...    32   4.3   
gi|23112771|gb|ZP_00098214.1|  (NZ_AABB01000231) hypothetica...    32   5.6   
gi|22998229|gb|ZP_00042346.1|  (NZ_AAAN01000010) hypothetica...    31   9.6   
gi|127015|sp|P22874|MERR_STAAU  MERCURIC RESISTANCE OPERON R...    31   9.6   
gi|17549586|ref|NP_522926.1|  (NC_003296) PROBABLE LIPOPROTE...    31   9.6   
gi|15645866|ref|NP_208044.1|  (NC_000915) oligopeptide ABC t...    31   9.6   
gi|17231842|ref|NP_488390.1|  (NC_003272) unknown protein [N...    31   9.6   

Alignments


>gi|22127970|ref|NP_671393.1|   (NC_004088) heat shock protein [Yersinia pestis KIM]
 gi|21961115|gb|AAM87644.1|AE014012_1   (AE014012) heat shock protein [Yersinia pestis KIM]
          Length = 168

 Score =  152 bits (385), Expect = 2e-36
 Identities = 81/112 (72%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = -3

Query: 502 IGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVEGPRLTV 323
           IGFDKLAS+        EPQGFPPYNIEK+DDNHYRISLALAGF+QSEL+IEVEGPRLTV
Sbjct: 28  IGFDKLASTM---QGGQEPQGFPPYNIEKTDDNHYRISLALAGFKQSELDIEVEGPRLTV 84

Query: 322 SGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ-KVAEIEKHISELXNMRQ 170
            GKPTP EKQVEYLHQGLV KEF LTFTLAEHL    A+ E  +  +  +RQ
Sbjct: 85  RGKPTPVEKQVEYLHQGLVRKEFSLTFTLAEHLNVDNAQFENGLLHIDLLRQ 136




 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 19/34 (55%), Positives = 26/34 (75%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           EH+ +  A+ ENGLL+ID+ R VPE L+P+RI I
Sbjct: 115 EHLNVDNAQFENGLLHIDLLRQVPEALQPQRIAI 148




 Score = 32.3 bits (72), Expect = 3.3
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -1

Query: 555 KGVVPMRNYDLSPLLRQGLVLINWPVQGXFVTGGRNPRG 439
           K +  MRNYDLSPLLRQ    I +      + GG+ P+G
Sbjct: 10  KELTYMRNYDLSPLLRQ---WIGFDKLASTMQGGQEPQG 45




 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 18/59 (30%), Positives = 26/59 (43%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           +NHYRI++   G          +   L VRG       +  YL+QG+  + F   F LA
Sbjct: 56  DNHYRISLALAGFKQSELDIEVEGPRLTVRGKPTPVEKQVEYLHQGLVRKEFSLTFTLA 114



>gi|16124195|ref|NP_407508.1|   (NC_003143) heat shock protein [Yersinia pestis]
 gi|15981976|emb|CAC93535.1|   (AJ414160) heat shock protein [Yersinia pestis]
          Length = 154

 Score =  152 bits (385), Expect = 2e-36
 Identities = 81/112 (72%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = -3

Query: 502 IGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVEGPRLTV 323
           IGFDKLAS+        EPQGFPPYNIEK+DDNHYRISLALAGF+QSEL+IEVEGPRLTV
Sbjct: 14  IGFDKLASTM---QGGQEPQGFPPYNIEKTDDNHYRISLALAGFKQSELDIEVEGPRLTV 70

Query: 322 SGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ-KVAEIEKHISELXNMRQ 170
            GKPTP EKQVEYLHQGLV KEF LTFTLAEHL    A+ E  +  +  +RQ
Sbjct: 71  RGKPTPVEKQVEYLHQGLVRKEFSLTFTLAEHLNVDNAQFENGLLHIDLLRQ 122




 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 19/34 (55%), Positives = 26/34 (75%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           EH+ +  A+ ENGLL+ID+ R VPE L+P+RI I
Sbjct: 101 EHLNVDNAQFENGLLHIDLLRQVPEALQPQRIAI 134




 Score = 32.0 bits (71), Expect = 4.3
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -1

Query: 540 MRNYDLSPLLRQGLVLINWPVQGXFVTGGRNPRG 439
           MRNYDLSPLLRQ    I +      + GG+ P+G
Sbjct: 1   MRNYDLSPLLRQ---WIGFDKLASTMQGGQEPQG 31




 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 18/59 (30%), Positives = 26/59 (43%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           +NHYRI++   G          +   L VRG       +  YL+QG+  + F   F LA
Sbjct: 42  DNHYRISLALAGFKQSELDIEVEGPRLTVRGKPTPVEKQVEYLHQGLVRKEFSLTFTLA 100



>gi|16762514|ref|NP_458131.1|   (NC_003198) heat shock protein B [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|16504819|emb|CAD03186.1|   (AL627280) heat shock protein B [Salmonella enterica subsp.
           enterica serovar Typhi]
          Length = 142

 Score =  119 bits (297), Expect(2) = 2e-28
 Identities = 58/94 (61%), Positives = 73/94 (76%)
 Frame = -3

Query: 502 IGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVEGPRLTV 323
           IGFDKLA++        E Q FPPYNIEKSDDNHYRI+LALAGFRQ +L+I++EG RLTV
Sbjct: 14  IGFDKLANA---LQNSGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLDIQLEGTRLTV 70

Query: 322 SGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ 221
            G P  PE + ++LHQGLV + F L+FTLAE+++
Sbjct: 71  KGTPEQPENEPKWLHQGLVMQPFSLSFTLAENME 104




 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 18/34 (52%), Positives = 25/34 (72%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           E++++ GA   NGLLYID+ R  PET+ P+RI I
Sbjct: 101 ENMEVSGATFTNGLLYIDLTRNEPETIPPQRIAI 134




 Score = 29.6 bits (65), Expect(2) = 5e-06
 Identities = 17/59 (28%), Positives = 25/59 (41%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           +NHYRI +   G          +   L V+G       E  +L+QG+  + F   F LA
Sbjct: 42  DNHYRITLALAGFRQEDLDIQLEGTRLTVKGTPEQPENEPKWLHQGLVMQPFSLSFTLA 100




 Score = 28.5 bits (62), Expect(2) = 2e-28
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 540 MRNYDLSPLLRQ 505
           MRNYDLSPLLRQ
Sbjct: 1   MRNYDLSPLLRQ 12



>gi|16767093|ref|NP_462708.1|   (NC_003197) small heat shock protein [Salmonella typhimurium LT2]
 gi|16422380|gb|AAL22667.1|   (AE008877) small heat shock protein [Salmonella typhimurium LT2]
          Length = 142

 Score =  119 bits (297), Expect(2) = 2e-28
 Identities = 58/94 (61%), Positives = 73/94 (76%)
 Frame = -3

Query: 502 IGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVEGPRLTV 323
           IGFDKLA++        E Q FPPYNIEKSDDNHYRI+LALAGFRQ +L+I++EG RLTV
Sbjct: 14  IGFDKLANA---LQNSGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLDIQLEGTRLTV 70

Query: 322 SGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ 221
            G P  PE + ++LHQGLV + F L+FTLAE+++
Sbjct: 71  KGTPEQPENEPKWLHQGLVMQPFSLSFTLAENME 104




 Score = 39.7 bits (91), Expect(2) = 2e-05
 Identities = 17/34 (50%), Positives = 25/34 (73%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           E++++ GA   NGLL+ID+ R  PET+ P+RI I
Sbjct: 101 ENMEVSGATFTNGLLHIDLTRNEPETIAPQRIAI 134




 Score = 29.6 bits (65), Expect(2) = 2e-05
 Identities = 17/59 (28%), Positives = 25/59 (41%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           +NHYRI +   G          +   L V+G       E  +L+QG+  + F   F LA
Sbjct: 42  DNHYRITLALAGFRQEDLDIQLEGTRLTVKGTPEQPENEPKWLHQGLVMQPFSLSFTLA 100




 Score = 28.5 bits (62), Expect(2) = 2e-28
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 540 MRNYDLSPLLRQ 505
           MRNYDLSPLLRQ
Sbjct: 1   MRNYDLSPLLRQ 12



>gi|15804285|ref|NP_290324.1|   (NC_002655) heat shock protein [Escherichia coli O157:H7 EDL933]
 gi|15833880|ref|NP_312653.1|   (NC_002695) heat shock protein IbpB [Escherichia coli O157:H7]
 gi|16131554|ref|NP_418141.1|   (NC_000913) heat shock protein [Escherichia coli K12]
 gi|7444971|pir||G65170   heat shock protein ibpB - Escherichia coli
 gi|290535|gb|AAA62038.1|   (L10328) heat shock inducible; alternate gene name ibpB
           [Escherichia coli]
 gi|1790120|gb|AAC76709.1|   (AE000445) heat shock protein [Escherichia coli K12]
 gi|12518527|gb|AAG58888.1|AE005600_6   (AE005600) heat shock protein [Escherichia coli O157:H7 EDL933]
 gi|13364101|dbj|BAB38049.1|   (AP002566) heat shock protein IbpB [Escherichia coli O157:H7]
          Length = 144

 Score =  114 bits (285), Expect(2) = 2e-26
 Identities = 56/100 (56%), Positives = 74/100 (74%)
 Frame = -3

Query: 520 PASASRIGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVE 341
           P     IGFDKLA++        E Q FPPYNIEKSDDNHYRI+LALAGFRQ +L I++E
Sbjct: 10  PLMRQWIGFDKLANA---LQNAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLEIQLE 66

Query: 340 GPRLTVSGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ 221
           G RL+V G P  P+++ ++LHQGL+ + F L+FTLAE+++
Sbjct: 67  GTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENME 106




 Score = 33.1 bits (74), Expect(2) = 2e-04
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           E++++ GA   NGLL+ID+ R  PE +  +RI I
Sbjct: 103 ENMEVSGATFVNGLLHIDLIRNEPEPIAAQRIAI 136




 Score = 32.3 bits (72), Expect(2) = 2e-04
 Identities = 18/59 (30%), Positives = 26/59 (43%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           +NHYRI +   G          +   L V+G       EK +L+QG+  + F   F LA
Sbjct: 44  DNHYRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLA 102




 Score = 26.2 bits (56), Expect(2) = 2e-26
 Identities = 10/12 (83%), Positives = 12/12 (99%)
 Frame = -1

Query: 540 MRNYDLSPLLRQ 505
           MRN+DLSPL+RQ
Sbjct: 3   MRNFDLSPLMRQ 14



>gi|124072|sp|P29210|IBPB_ECOLI   16 kDa heat shock protein B
 gi|321835|pir||B45245   heat shock protein IbpB - Escherichia coli
 gi|147370|gb|AAA24425.1|   (M94104) putative [Escherichia coli]
          Length = 142

 Score =  114 bits (285), Expect(2) = 2e-26
 Identities = 56/100 (56%), Positives = 74/100 (74%)
 Frame = -3

Query: 520 PASASRIGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVE 341
           P     IGFDKLA++        E Q FPPYNIEKSDDNHYRI+LALAGFRQ +L I++E
Sbjct: 8   PLMRQWIGFDKLANA---LQNAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLEIQLE 64

Query: 340 GPRLTVSGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ 221
           G RL+V G P  P+++ ++LHQGL+ + F L+FTLAE+++
Sbjct: 65  GTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENME 104




 Score = 33.1 bits (74), Expect(2) = 3e-04
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           E++++ GA   NGLL+ID+ R  PE +  +RI I
Sbjct: 101 ENMEVSGATFVNGLLHIDLIRNEPEPIAAQRIAI 134




 Score = 32.3 bits (72), Expect(2) = 3e-04
 Identities = 18/59 (30%), Positives = 26/59 (43%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           +NHYRI +   G          +   L V+G       EK +L+QG+  + F   F LA
Sbjct: 42  DNHYRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLA 100




 Score = 26.2 bits (56), Expect(2) = 2e-26
 Identities = 10/12 (83%), Positives = 12/12 (99%)
 Frame = -1

Query: 540 MRNYDLSPLLRQ 505
           MRN+DLSPL+RQ
Sbjct: 1   MRNFDLSPLMRQ 12



>gi|16124196|ref|NP_407509.1|   (NC_003143) heat shock protein [Yersinia pestis]
 gi|22127971|ref|NP_671394.1|   (NC_004088) heat shock protein [Yersinia pestis KIM]
 gi|15981977|emb|CAC93536.1|   (AJ414160) heat shock protein [Yersinia pestis]
 gi|21961116|gb|AAM87645.1|AE014012_2   (AE014012) heat shock protein [Yersinia pestis KIM]
          Length = 137

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 39/100 (39%), Positives = 57/100 (57%)
 Frame = -3

Query: 520 PASASRIGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVE 341
           P   S IGFD+L +      +     G+PPYN+E  D+N+YRI++A+AGF + EL I  +
Sbjct: 8   PLYRSAIGFDRLFNL-LESGQNQSNGGYPPYNVELVDENNYRIAIAVAGFAEQELEITTQ 66

Query: 340 GPRLTVSGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHLQ 221
              L V G       Q  YL+QG+  + F+  F LAEH++
Sbjct: 67  DNLLIVRGSHANEPAQRTYLYQGIAERNFERKFQLAEHIK 106




 Score = 73.2 bits (178), Expect(2) = 9e-25
 Identities = 37/59 (62%), Positives = 42/59 (70%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           EN+YRIAI   G          +   LIVRG+H NEPA++TYLYQGIAERNFERKFQLA
Sbjct: 44  ENNYRIAIAVAGFAEQELEITTQDNLLIVRGSHANEPAQRTYLYQGIAERNFERKFQLA 102




 Score = 61.6 bits (148), Expect(2) = 9e-25
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEIK 650
           EHI+IKGA L NGLLYID++R+VPE+LKPRRIEIK
Sbjct: 103 EHIKIKGANLVNGLLYIDLERLVPESLKPRRIEIK 137



>gi|15804286|ref|NP_290325.1|   (NC_002655) heat shock protein [Escherichia coli O157:H7 EDL933]
 gi|15833881|ref|NP_312654.1|   (NC_002695) heat shock protein IbpA [Escherichia coli O157:H7]
 gi|16131555|ref|NP_418142.1|   (NC_000913) heat shock protein [Escherichia coli K12]
 gi|124071|sp|P29209|IBPA_ECOLI   16 kDa heat shock protein A
 gi|321834|pir||A45245   heat shock protein IbpA - Escherichia coli
 gi|147369|gb|AAA24424.1|   (M94104) putative [Escherichia coli]
 gi|290536|gb|AAA62039.1|   (L10328) heat shock inducible; alternate gene name ibpA
           [Escherichia coli]
 gi|1790122|gb|AAC76710.1|   (AE000446) heat shock protein [Escherichia coli K12]
 gi|12518528|gb|AAG58889.1|AE005600_7   (AE005600) heat shock protein [Escherichia coli O157:H7 EDL933]
 gi|13364102|dbj|BAB38050.1|   (AP002566) heat shock protein IbpA [Escherichia coli O157:H7]
          Length = 137

 Score = 79.0 bits (193), Expect = 3e-14
 Identities = 40/99 (40%), Positives = 60/99 (60%)
 Frame = -3

Query: 520 PASASRIGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVE 341
           P   S IGFD+L +     ++     G+PPYN+E  D+NHYRI++A+AGF +SEL I  +
Sbjct: 8   PLYRSAIGFDRLFN-HLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESELEITAQ 66

Query: 340 GPRLTVSGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHL 224
              L V G     +K+  YL+QG+  + F+  F LAE++
Sbjct: 67  DNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENI 105




 Score = 70.1 bits (170), Expect(2) = 4e-21
 Identities = 35/59 (59%), Positives = 40/59 (67%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           ENHYRIAI   G          +   L+V+GAH +E  E+TYLYQGIAERNFERKFQLA
Sbjct: 44  ENHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA 102




 Score = 52.4 bits (124), Expect(2) = 4e-21
 Identities = 22/34 (64%), Positives = 29/34 (84%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           E+I ++GA L NGLLYID++R++PE  KPRRIEI
Sbjct: 103 ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEI 136



>gi|16762513|ref|NP_458130.1|   (NC_003198) heat shock protein A [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|16767094|ref|NP_462709.1|   (NC_003197) small heat shock protein [Salmonella typhimurium LT2]
 gi|16422381|gb|AAL22668.1|   (AE008877) small heat shock protein [Salmonella typhimurium LT2]
 gi|16504818|emb|CAD03185.1|   (AL627280) heat shock protein A [Salmonella enterica subsp.
           enterica serovar Typhi]
          Length = 137

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 40/99 (40%), Positives = 60/99 (60%)
 Frame = -3

Query: 520 PASASRIGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVE 341
           P   S IGFD+L +     ++     G+PPYN+E  D+NHYRI++A+AGF +SEL I  +
Sbjct: 8   PLYRSAIGFDRLFNL-LENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESELEITAQ 66

Query: 340 GPRLTVSGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHL 224
              L V G     +K+  YL+QG+  + F+  F LAE++
Sbjct: 67  DNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENI 105




 Score = 70.1 bits (170), Expect(2) = 2e-20
 Identities = 35/59 (59%), Positives = 40/59 (67%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQLA 756
           ENHYRIAI   G          +   L+V+GAH +E  E+TYLYQGIAERNFERKFQLA
Sbjct: 44  ENHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA 102




 Score = 50.4 bits (119), Expect(2) = 2e-20
 Identities = 21/34 (61%), Positives = 29/34 (84%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEI 653
           E+I ++GA L NGLLYI+++R++PE  KPRRIEI
Sbjct: 103 ENIHVRGANLVNGLLYIELERVIPEANKPRRIEI 136



>gi|16126497|ref|NP_421061.1|   (NC_002696) heat shock protein, Hsp20 family [Caulobacter
           crescentus CB15]
 gi|13423769|gb|AAK24229.1|   (AE005896) heat shock protein, Hsp20 family [Caulobacter crescentus
           CB15]
          Length = 152

 Score = 87.8 bits (216), Expect = 7e-17
 Identities = 41/99 (41%), Positives = 62/99 (62%)
 Frame = -3

Query: 520 PASASRIGFDKLASSRFXCHRRPEPQGFPPYNIEKSDDNHYRISLALAGFRQSELNIEVE 341
           P   S +GFD+LA       R     G+PPYNIE++ +N YRI +A+AGF+  ELN+EV+
Sbjct: 8   PLYRSLVGFDRLADQLDAAARNEAASGYPPYNIERTGENAYRIEIAVAGFKPEELNVEVK 67

Query: 340 GPRLTVSGKPTPPEKQVEYLHQGLVCKEFQLTFTLAEHL 224
              LTV+G+    ++  +YLH+GL  + F+  F L ++L
Sbjct: 68  ENLLTVTGRKAANDEAKQYLHRGLAERNFERKFQLTDYL 106




 Score = 43.5 bits (101), Expect(2) = 6e-09
 Identities = 26/58 (44%), Positives = 29/58 (49%)
 Frame = -2

Query: 932 ENHYRIAIR*XGXXXXXXXXXRKIICLIVRGAHNNEPAEKTYLYQGIAERNFERKFQL 759
           EN YRI I   G          K   L V G        K YL++G+AERNFERKFQL
Sbjct: 45  ENAYRIEIAVAGFKPEELNVEVKENLLTVTGRKAANDEAKQYLHRGLAERNFERKFQL 102




 Score = 37.7 bits (86), Expect(2) = 6e-09
 Identities = 17/35 (48%), Positives = 25/35 (70%)
 Frame = -3

Query: 754 EHIQIKGAKLENGLLYIDMQRIVPETLKPRRIEIK 650
           +++ +  A L NGLL I ++R +PE LKPR +EIK
Sbjct: 104 DYLVVVDADLSNGLLSIALKRELPEALKPRTVEIK 138






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Oct 17, 2002 12:19 AM
  Number of letters in database: 386,724,011
  Number of sequences in database:  1,211,778
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,881,374
Number of Sequences: 1211778
Number of extensions: 4347783
Number of successful extensions: 11020
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 10470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10977
length of database: 131,524,244
effective HSP length: 115
effective length of database: 82,591,169
effective search space used: 16105277955
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)