BLASTX 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
RID: 1030631336-05970-8432
Query= 10H1_131_132BLASTX
(909 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
1,039,285 sequences; 328,747,273 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Score E
Sequences producing significant alignments: (bits) Value
gi|1778510|gb|AAB40793.1| (U82598) isochorismate synthase [... 72 2e-12
gi|15800308|ref|NP_286320.1| (NC_002655) isochorismate hydr... 72 2e-12
gi|145840|gb|AAA18491.1| (M36700) iron chelator protein [Es... 72 2e-12
gi|223154|prf||0601198A polymerase beta,RNA [Escherichia coli] 35 0.26
gi|16128566|ref|NP_415115.1| (NC_000913) enterochelin synth... 31 4.8
gi|15800297|ref|NP_286309.1| (NC_002655) enterobactin synth... 31 4.8
gi|6018425|emb|CAB57861.1| (X17426) enterobactin [Escherich... 31 4.8
gi|78421|pir||JV0078 entD protein - Escherichia coli >gi|16... 31 4.8
gi|1778499|gb|AAB40782.1| (U82598) enterobactin synthetase ... 31 4.8
Alignments
>gi|1778510|gb|AAB40793.1| (U82598) isochorismate synthase [Escherichia coli]
Length = 395
Score = 72.4 bits (176), Expect = 2e-12
Identities = 36/87 (41%), Positives = 49/87 (55%)
Frame = +3
Query: 579 FLYRSEFRSLSADGVFERIETPAFGGEQEGSALAQHIRQALARAKAAGQETPVVVGAIPF 758
F + S +RS + G F R + PA G+ S Q + A AKA G + PV+VGAIPF
Sbjct: 25 FFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPF 84
Query: 759 DTRRPSCLYVPENCQFVANDSFTRAAR 839
D R+PS LY+PE+ Q + +AR
Sbjct: 85 DPRQPSSLYIPESWQSFSRQEKQASAR 111
>gi|15800308|ref|NP_286320.1| (NC_002655) isochorismate hydroxymutase 2, enterochelin
biosynthesis [Escherichia coli O157:H7 EDL933]
gi|15829886|ref|NP_308659.1| (NC_002695) isochorismate hydroxymutase 2 [Escherichia coli
O157:H7]
gi|16128576|ref|NP_415125.1| (NC_000913) isochorismate hydroxymutase 2, enterochelin
biosynthesis [Escherichia coli K12]
gi|585097|sp|P10377|ENTC_ECOLI Isochorismate synthase entC (Isochorismate mutase)
gi|68479|pir||SYECIK isochorismate synthase (EC 5.4.99.6) [validated] - Escherichia coli
gi|450376|gb|AAA16100.1| (M24142) isochorismate synthase [Escherichia coli]
gi|1786809|gb|AAC73694.1| (AE000165) isochorismate hydroxymutase 2, enterochelin biosynthesis
[Escherichia coli K12]
gi|12513486|gb|AAG54928.1|AE005239_3 (AE005239) isochorismate hydroxymutase 2, enterochelin biosynthesis
[Escherichia coli O157:H7 EDL933]
gi|13360090|dbj|BAB34055.1| (AP002552) isochorismate hydroxymutase 2 [Escherichia coli O157:H7]
Length = 391
Score = 72.4 bits (176), Expect = 2e-12
Identities = 36/87 (41%), Positives = 49/87 (55%)
Frame = +3
Query: 579 FLYRSEFRSLSADGVFERIETPAFGGEQEGSALAQHIRQALARAKAAGQETPVVVGAIPF 758
F + S +RS + G F R + PA G+ S Q + A AKA G + PV+VGAIPF
Sbjct: 21 FFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPF 80
Query: 759 DTRRPSCLYVPENCQFVANDSFTRAAR 839
D R+PS LY+PE+ Q + +AR
Sbjct: 81 DPRQPSSLYIPESWQSFSRQEKQASAR 107
>gi|145840|gb|AAA18491.1| (M36700) iron chelator protein [Escherichia coli]
Length = 391
Score = 72.4 bits (176), Expect = 2e-12
Identities = 36/87 (41%), Positives = 49/87 (55%)
Frame = +3
Query: 579 FLYRSEFRSLSADGVFERIETPAFGGEQEGSALAQHIRQALARAKAAGQETPVVVGAIPF 758
F + S +RS + G F R + PA G+ S Q + A AKA G + PV+VGAIPF
Sbjct: 21 FFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPF 80
Query: 759 DTRRPSCLYVPENCQFVANDSFTRAAR 839
D R+PS LY+PE+ Q + +AR
Sbjct: 81 DPRQPSSLYIPESWQSFSRQEKQASAR 107
>gi|223154|prf||0601198A polymerase beta,RNA [Escherichia coli]
Length = 253
Score = 35.4 bits (80), Expect = 0.26
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 763 RAGLPACTCLKTASLSPTTALPAPRARCCNSRIA 864
R +P+CT ++ +S +PT P R +CC +R++
Sbjct: 208 RVIVPSCTVVRASSFTPTKVKPTLRVKCCTTRVS 241
>gi|16128566|ref|NP_415115.1| (NC_000913) enterochelin synthetase, component D [Escherichia coli
K12]
gi|1169536|sp|P19925|ENTD_ECOLI 4'-phosphopantetheinyl transferase entD (Enterobactin synthetase
component D) (Enterochelin synthase D)
gi|7465841|pir||E64791 enterobactin synthetase component D - Escherichia coli
gi|1786797|gb|AAC73684.1| (AE000163) enterochelin synthetase, component D [Escherichia coli
K12]
Length = 209
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 35 EALLREGAAVQRLLTLTFSAKESLFKALYPQVRCYFDFLDARMVAVDTQR 184
E L G A LTL FSAKES FKA +++ FLD ++++ + Q+
Sbjct: 134 ERLADCGLAFSLALTLAFSAKESAFKA--SEIQTDAGFLDYQIISWNKQQ 181
>gi|15800297|ref|NP_286309.1| (NC_002655) enterobactin synthetase component D [Escherichia coli
O157:H7 EDL933]
gi|15829876|ref|NP_308649.1| (NC_002695) enterochelin synthetase, component D [Escherichia coli
O157:H7]
gi|22001586|sp|Q8XBW8|ENTD_ECO57 4'-phosphopantetheinyl transferase entD (Enterobactin synthetase
component D) (Enterochelin synthase D)
gi|12513472|gb|AAG54917.1|AE005238_3 (AE005238) enterobactin synthetase component D [Escherichia coli
O157:H7 EDL933]
gi|13360080|dbj|BAB34045.1| (AP002552) enterochelin synthetase, component D [Escherichia coli
O157:H7]
Length = 209
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 35 EALLREGAAVQRLLTLTFSAKESLFKALYPQVRCYFDFLDARMVAVDTQR 184
E L G A LTL FSAKES FKA +++ FLD ++++ + Q+
Sbjct: 134 ERLADCGLAFSLALTLAFSAKESAFKA--SEIQTDAGFLDYQIISWNKQQ 181
>gi|6018425|emb|CAB57861.1| (X17426) enterobactin [Escherichia coli]
Length = 209
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 35 EALLREGAAVQRLLTLTFSAKESLFKALYPQVRCYFDFLDARMVAVDTQR 184
E L G A LTL FSAKES FKA +++ FLD ++++ + Q+
Sbjct: 134 ERLADCGLAFSLALTLAFSAKESAFKA--SEIQTDAGFLDYQIISWNKQQ 181
>gi|78421|pir||JV0078 entD protein - Escherichia coli
gi|1651241|dbj|BAA35224.1| (D90700) EntD protein. [Escherichia coli]
Length = 215
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 35 EALLREGAAVQRLLTLTFSAKESLFKALYPQVRCYFDFLDARMVAVDTQR 184
E L G A LTL FSAKES FKA +++ FLD ++++ + Q+
Sbjct: 140 ERLADCGLAFSLALTLAFSAKESAFKA--SEIQTDAGFLDYQIISWNKQQ 187
>gi|1778499|gb|AAB40782.1| (U82598) enterobactin synthetase component D [Escherichia coli]
Length = 256
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 35 EALLREGAAVQRLLTLTFSAKESLFKALYPQVRCYFDFLDARMVAVDTQR 184
E L G A LTL FSAKES FKA +++ FLD ++++ + Q+
Sbjct: 181 ERLADCGLAFSLALTLAFSAKESAFKA--SEIQTDAGFLDYQIISWNKQQ 228
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
Posted date: Aug 28, 2002 2:02 AM
Number of letters in database: 328,747,273
Number of sequences in database: 1,039,285
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,273,726
Number of Sequences: 1039285
Number of extensions: 2568117
Number of successful extensions: 8041
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 7726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8035
length of database: 88,091,237
effective HSP length: 112
effective length of database: 55,707,557
effective search space used: 10584435830
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)